PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_47684
Common NameKK1_048207
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 243aa    MW: 27862.6 Da    PI: 8.3817
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_47684genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.23.5e-1472124155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +++ h+e+Er+RR+++ + f+ Lr+llP  +   ++K s ++   +Av+YIk++q
  C.cajan_47684  72 KKMIHKEIERQRRQEMATFFASLRSLLPLEF--IKGKRSISDHMNEAVNYIKHMQ 124
                    5788*************************65..*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.32E-1470141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.83371123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.86E-1071128No hitNo description
PfamPF000102.3E-1172124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.1E-1273150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-677129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MFPLQRGNEL VIQFSNSPHQ HEHKISEDLI LDDYASLDVN DSDRKITSSR PKKLFCVADK  60
KNHGNSNEHN KKKMIHKEIE RQRRQEMATF FASLRSLLPL EFIKGKRSIS DHMNEAVNYI  120
KHMQNNIKEL GARRDELKKL SNYSNTENNQ EGLHTSCNFT VHENNGIMGI EITSGSREKR  180
PKLSKLLKLL IEEGLEIVSC LSTEVNGRLI YSVQCEVNNS SSVDLSELRK KVCNAFPTFT  240
CSD
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_47684
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020208943.11e-180transcription factor bHLH36
SwissprotQ9FLI18e-41BH036_ARATH; Transcription factor bHLH36
TrEMBLA0A151QME01e-178A0A151QME0_CAJCA; Transcription factor bHLH36
STRINGGLYMA16G32620.11e-138(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.11e-35bHLH family protein