PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_46953
Common NameKK1_047524
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 444aa    MW: 50116.2 Da    PI: 5.4599
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_46953genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM96.44.3e-301042442128
            NAM   2 ppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.......tksgy 82 
                    p G++F+P+d el+ e+L++k+   +    + ++e+i++++    i++++P++Lp  +k++ + ++fF+++ ++yatg+rk+r+        ++ +
  C.cajan_46953 104 PLGVKFDPSDVELL-EHLAEKCGIGStqphMFINEFIPTLEgdegICYTHPENLP-GAKKDGRYVHFFHRTINAYATGQRKRRKindhgltEEHVR 197
                    89************.999999877665555233334554423344**********.556778999******************8567776444788 PP

            NAM  83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                    W++tgk+k++++ +g ++g kk++v+y  +++ pk+ k++Wvmh+y+l
  C.cajan_46953 198 WHKTGKTKAIIE-DGVHKGFKKIMVLYlkSKNGPKPYKSNWVMHQYHL 244
                    ************.999***********7666889999*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-3587263IPR003441NAC domain
PROSITE profilePS5100529.247103263IPR003441NAC domain
PfamPF023654.5E-12104244IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    Send to blast
MSKVLVMTFT RFSMLPRPNQ RSGVPLGQPW GPSKAQARLS VQWKMPMPRH RSWLIDIGGF  60
AKKVKSNTQS SADQIKDCGA YRECPKCNCH IDNSDVSAEW PGFPLGVKFD PSDVELLEHL  120
AEKCGIGSTQ PHMFINEFIP TLEGDEGICY THPENLPGAK KDGRYVHFFH RTINAYATGQ  180
RKRRKINDHG LTEEHVRWHK TGKTKAIIED GVHKGFKKIM VLYLKSKNGP KPYKSNWVMH  240
QYHLGTGEDE KEGAYVVSKI FYQQRNHTEK NEENPMTEDP DNMTLRTSPR TPKPNPPNPP  300
RVGKSVDCDD NIDETLLLSF AQDTKTIPEE SHAPLSAIPD EDNTGNIAWL AGESQAEENT  360
DEYNGLDDIL LCKEILDSSV LNDSGLDSIN LNDNACYENE MARNDNVSCG ISVLDTLELD  420
TPDFDISNWN FGSQDSILEW INRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_46953
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150378e-60AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020208659.10.0SUPPRESSOR OF GAMMA RESPONSE 1
TrEMBLA0A151QNT70.0A0A151QNT7_CAJCA; NAC domain-containing protein 8
STRINGGLYMA19G08510.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75723047
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01600.11e-86NAC domain containing protein 44