PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_46853

Common Name

KK1_043793

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

bHLH

Protein Properties

Length: 352aa MW: 37898.6 Da PI: 7.7308

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_46853	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15	4.5e-05	306	325	36	55
S-STCHHHHHHHHHHHHHHH CS HLH 36 kKlsKaeiLekAveYIksLq 55 + + a++L +AveYIk+Lq C.cajan_46853 306 RQTNTADMLDLAVEYIKDLQ 325 44899**************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.280.10	2.6E-6	284	338	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	8.82E-4	300	327	No hit	No description
SuperFamily	SSF47459	4.32E-5	305	338	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence Send to blast
MDSHTHHHHQ GHQQNQSSSS GLLRFRSAPS SLLSNLTPSF YGGGSSSLEG NNSSNNNDKD 60 LSSMNSHKGY GVGLPPHYPR HGSSAGAATS SSAMEGSYNG LMGMDHEVPH KGFGSTLLRQ 120 SSSPAGIFSN NNISFQNGFA TMKGVGNYGG VNGSNGELSP CINRLKNQIS FSPRNATSLG 180 ILSQISEIES EDIDATSPDD DRRHGGSDTQ HYGPGFPYGS WNGTPQLSEN PSGLKRGRSG 240 NEKLFSDVQN GELGNQVSML SHHLSLPKTS AEMITMEKLL QFPNSVPCKI RAKRGCSTHP 300 RSIAERQTNT ADMLDLAVEY IKDLQKQFKN LSEKRANCTC IGVQKEDTNQ IS

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence Send to blast

MDSHTHHHHQ GHQQNQSSSS GLLRFRSAPS SLLSNLTPSF YGGGSSSLEG NNSSNNNDKD  60
LSSMNSHKGY GVGLPPHYPR HGSSAGAATS SSAMEGSYNG LMGMDHEVPH KGFGSTLLRQ  120
SSSPAGIFSN NNISFQNGFA TMKGVGNYGG VNGSNGELSP CINRLKNQIS FSPRNATSLG  180
ILSQISEIES EDIDATSPDD DRRHGGSDTQ HYGPGFPYGS WNGTPQLSEN PSGLKRGRSG  240
NEKLFSDVQN GELGNQVSML SHHLSLPKTS AEMITMEKLL QFPNSVPCKI RAKRGCSTHP  300
RSIAERQTNT ADMLDLAVEY IKDLQKQFKN LSEKRANCTC IGVQKEDTNQ IS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_46853

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020206477.1	0.0	transcription factor bHLH130
Refseq	XP_020206478.1	0.0	transcription factor bHLH130
TrEMBL	A0A151QY35	0.0	A0A151QY35_CAJCA; Transcription factor bHLH130 family
STRING	GLYMA02G29830.1	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5177	32	53

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	5e-58	bHLH family protein