PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_46614
Common NameKK1_046218
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family AP2
Protein Properties Length: 396aa    MW: 44421.8 Da    PI: 5.8935
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_46614genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.41.5e-1251107155
            AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                    s y+GV++++++gr++A+++d  s+n+ + k+ + g ++t+e Aa+ ++ a++k++g
  C.cajan_46614  51 SIYRGVTRHRWTGRFEAHLWDkTSWNNiQGKKGRQGAYDTEEAAARTYDLAALKYWG 107
                    57*******************7777**87777788********************98 PP
2AP250.64.9e-16150201155
            AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    s+y+GV +++ +grW+A+I  ++    +k+ +lg+f t eeAa a++ a+ +++g
  C.cajan_46614 150 SKYRGVARHHHNGRWEARIGRVCG---NKYLYLGTFKTQEEAAVAYDMAAIEYRG 201
                    89****99***********99644...4*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.41E-1951116No hitNo description
SuperFamilySSF541711.24E-1551117IPR016177DNA-binding domain
PfamPF008472.2E-951107IPR001471AP2/ERF domain
SMARTSM003801.7E-1952121IPR001471AP2/ERF domain
PROSITE profilePS5103219.16452115IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.1E-1352116IPR001471AP2/ERF domain
PRINTSPR003674.8E-65364IPR001471AP2/ERF domain
CDDcd000183.09E-24150211No hitNo description
SuperFamilySSF541719.15E-18150211IPR016177DNA-binding domain
PfamPF008471.3E-10150201IPR001471AP2/ERF domain
SMARTSM003805.3E-27151215IPR001471AP2/ERF domain
PROSITE profilePS5103218.149151209IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-18151209IPR001471AP2/ERF domain
PRINTSPR003674.8E-6191211IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
MKRSPASSCS SSSSVGIETP IQSEKRRPKH PRRNLKSQKC NQDQTNGGRS SIYRGVTRHR  60
WTGRFEAHLW DKTSWNNIQG KKGRQGAYDT EEAAARTYDL AALKYWGKDA TLNFPIENYT  120
KDLEEIDKAS KEEYLASLRR QSSGFSRGIS KYRGVARHHH NGRWEARIGR VCGNKYLYLG  180
TFKTQEEAAV AYDMAAIEYR GVNAVTNFDI SNYMDKIKKK NDQTETQTAP NSSDSEEAEV  240
EQHTKVTPPP SENLHMPPQH QDQVEHTNEE EPSMTTMMEH VLDQDLPWSL MYSGLSELEQ  300
PHLGFGGGKA DDLACMFDGA AFDEDIDYLF STEPGGTEND INVRAVFDSI ESRDTNEAGG  360
RIIVGDDHDN KHKMSPFASS SSPSSTTTTD SCNLAL
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_46614
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGU2200510.0GU220051.1 Glycine max wrinkled 1 (WRI1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020207995.10.0ethylene-responsive transcription factor WRI1
RefseqXP_029126094.10.0ethylene-responsive transcription factor WRI1
TrEMBLA0A151QRS90.0A0A151QRS9_CAJCA; AP2-like ethylene-responsive transcription factor AIL5
STRINGGLYMA08G24420.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98593241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.31e-101AP2 family protein