PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_46277
Common NameKK1_042746
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family G2-like
Protein Properties Length: 359aa    MW: 39830.8 Da    PI: 8.0082
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_46277genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.52.2e-31220274155
        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                    k+r+rWt+eLHe+Fve+v++LGG+ekAtPk+il+lm+ +gLt+ h+kSHLQkYR+
  C.cajan_46277 220 KTRIRWTQELHEKFVECVNRLGGAEKATPKAILRLMESDGLTIFHIKSHLQKYRI 274
                    68****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.334217277IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.4E-28217275IPR009057Homeodomain-like
SuperFamilySSF466892.69E-17218274IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-23220275IPR006447Myb domain, plants
PfamPF002495.3E-9224273IPR001005SANT/Myb domain
PfamPF143795.7E-21304350IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MNENEIDCVG RIRQSYGLNG DLNSEFGNCS SQYFDIRQTS NMNQPLAMAS GGGVEQEPHI  60
IGQTKSSSSI ISRFESPASA FYATEICMGL PQYDSQVANQ PIPNFDLPIP LQAMLKSQLN  120
SGQCCGSPEK SNKIPCGNFP GSNFLPIEQP KLFIDDAASI SRSPSIPSIG NHDQAFSCGT  180
YNLPAAQRSF SSQQEMLSPT GSMSTTSGNS TSNGPTASSK TRIRWTQELH EKFVECVNRL  240
GGAEKATPKA ILRLMESDGL TIFHIKSHLQ KYRIAKYMPQ STQGKSDKRT NVENVHLDVK  300
TGLQIKEALQ LQLDVQRRLH EQLEIQRKLQ LRIEEQGKQL KKMFDQQQKT SDNHLSTQI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A6e-24220277158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B6e-24220277158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C6e-24220277158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D6e-24220277158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_46277
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2361413e-80AC236141.2 Glycine max clone GM_WBb0004A16, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006587215.10.0myb family transcription factor PHL5 isoform X1
RefseqXP_028180223.10.0myb family transcription factor PHL5-like isoform X1
SwissprotQ0WVU32e-68PHL5_ARATH; Myb family transcription factor PHL5
TrEMBLA0A151R0S20.0A0A151R0S2_CAJCA; Myb family transcription factor APL
STRINGGLYMA09G17404.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37403465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.12e-68G2-like family protein