PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_46011 | ||||||||
Common Name | KK1_047861 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | C2H2 | ||||||||
Protein Properties | Length: 310aa MW: 34878.9 Da PI: 7.9715 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12 | 0.00063 | 4 | 26 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C +sFs+ L H+r+H C.cajan_46011 4 HKCKLCFRSFSNGRALGGHMRSH 26 79********************9 PP | |||||||
2 | zf-C2H2 | 13.9 | 0.00016 | 188 | 210 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k+F++ L H +H C.cajan_46011 188 YKCETCNKVFRSYQALGGHRASH 210 9***********99999998887 PP | |||||||
3 | zf-C2H2 | 10.8 | 0.0015 | 237 | 259 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C ++F + L H rtH C.cajan_46011 237 HECPVCFRVFASGQALGGHKRTH 259 79*******************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00355 | 0.065 | 4 | 26 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 10.679 | 4 | 31 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 2.6E-6 | 4 | 27 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 1.53E-8 | 4 | 26 | No hit | No description |
PROSITE pattern | PS00028 | 0 | 6 | 26 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 1.53E-8 | 183 | 210 | No hit | No description |
Pfam | PF13912 | 1.4E-11 | 187 | 212 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 10.616 | 188 | 215 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.012 | 188 | 210 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 190 | 210 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 2.31E-5 | 233 | 262 | No hit | No description |
SMART | SM00355 | 0.22 | 237 | 259 | IPR015880 | Zinc finger, C2H2-like |
Pfam | PF13912 | 1.3E-10 | 237 | 259 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 9.556 | 237 | 264 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 239 | 259 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence Send to blast |
MDKHKCKLCF RSFSNGRALG GHMRSHMMNL PLSKPEEAFS RTIQLSFEAD IRLVDPEFSF 60 AAADTGSVIL QDRESETESS KNNPTRRRSK RPWNNNNNNY YNYNNERNKK QVVGEKSKTE 120 SWVEQEPASS VSDATTEEDV AYCLMMLSRD KWKRQKEEAQ VEEAEEHEES QETMKVCKNR 180 GGGGGGRYKC ETCNKVFRSY QALGGHRASH KKMKVNVKVD EGEHNKSGPC VAEKKIHECP 240 VCFRVFASGQ ALGGHKRTHV TNAATTLIPS TSSKFGNTFI DLNLPAPIDD DDASQIENSA 300 VSDAEFVKTR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in stress responses. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_46011 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015037 | 2e-41 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020208807.1 | 0.0 | zinc finger protein ZAT9 | ||||
Refseq | XP_020208808.1 | 0.0 | zinc finger protein ZAT9 | ||||
Refseq | XP_029126257.1 | 0.0 | zinc finger protein ZAT9 | ||||
Swissprot | Q9M202 | 7e-70 | ZAT9_ARATH; Zinc finger protein ZAT9 | ||||
TrEMBL | A0A151QN44 | 0.0 | A0A151QN44_CAJCA; Uncharacterized protein | ||||
STRING | XP_007140808.1 | 1e-147 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF767 | 34 | 122 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60580.1 | 4e-71 | C2H2-like zinc finger protein |