PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_45151
Common NameKK1_041995
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family TCP
Protein Properties Length: 350aa    MW: 38721.2 Da    PI: 8.8966
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_45151genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP101.11.9e-31531823107
            TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.......eaesssssasnsssg... 88 
                    g kdrhsk++T +g+RdRRvRls+++a+ ++dLqd+LG+ ++sk ++WLl++ak++i+el+ ++ ++ +++              ++++ s +   
  C.cajan_45151  53 GNKDRHSKVCTIRGLRDRRVRLSVPTAIHLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPIPPGNFTlgypslvA-----CNNDQFSTSreg 143
                    579************************************************************8888866665432221.....222211111121 PP

            TCP  89 ...........................kaaksaakskksqksaasa 107
                                               +       s++++++++s+
  C.cajan_45151 144 sgqntlwkpkskevsgemvsgkanwmnR-------SEDDDNDKSSN 182
                    2223343333333333333322222221.......11111111111 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.2E-2953189IPR005333Transcription factor, TCP
PROSITE profilePS5136930.40854112IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009965Biological Processleaf morphogenesis
GO:0030154Biological Processcell differentiation
GO:0031347Biological Processregulation of defense response
GO:0045962Biological Processpositive regulation of development, heterochronic
GO:0009507Cellular Componentchloroplast
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MINSTKEAEF PLKQEGLSSS DHHEKEKATS SSSSQWLKLK DPRIVRVSRA FGGNKDRHSK  60
VCTIRGLRDR RVRLSVPTAI HLYDLQDRLG LNQPSKVVDW LLNAAKHEID ELPPLPIPPG  120
NFTLGYPSLV ACNNDQFSTS REGSGQNTLW KPKSKEVSGE MVSGKANWMN RSEDDDNDKS  180
SNNNDDKQSN SCHGAHVLPN SLLPRANHPS FLGLMNTMPS LGYQWDPNSG DVAQWANHGF  240
VNQADIHSIN VVPFPSNLAL STGNTTTPQI LVCPPGATQP YFPSHHVASM EMNQRQLNHY  300
QMLSSSSQNF LANSLNPSQV ISQQGKVPFS LGKPKLLHSP NSSESHSRKH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zkt_A5e-1859113155Putative transcription factor PCF6
5zkt_B5e-1859113155Putative transcription factor PCF6
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00326DAPTransfer from AT3G02150Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_45151
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020205265.10.0transcription factor TCP13 isoform X2
RefseqXP_020205266.10.0transcription factor TCP13 isoform X2
RefseqXP_020205268.10.0transcription factor TCP13 isoform X2
RefseqXP_020205269.10.0transcription factor TCP13 isoform X2
RefseqXP_020205270.10.0transcription factor TCP13 isoform X2
RefseqXP_020205272.10.0transcription factor TCP13 isoform X2
RefseqXP_029125515.10.0transcription factor TCP13 isoform X1
RefseqXP_029125516.10.0transcription factor TCP13 isoform X2
TrEMBLA0A151R2M50.0A0A151R2M5_CAJCA; Transcription factor TCP13
STRINGXP_007151337.11e-179(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF93234119
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02150.12e-37plastid transcription factor 1