PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_43747
Common NameKK1_042719
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family TCP
Protein Properties Length: 366aa    MW: 41991.5 Da    PI: 7.053
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_43747genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP136.52.3e-421152712135
            TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....................ssssasec.eae 76 
                    +gk+drhski T++g+RdRR+Rls+e+a+rfF Lqd+LGfdk+skt+eWLl+qak +i   ++                      sss+sec e  
  C.cajan_43747 115 TGKRDRHSKINTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVEWLLNQAKDEINRVAREkkkdkkknhdddhncgaksgASSSSSECeE-- 208
                    79**************************************************************888888766666666665544444445542.. PP

            TCP  77 sssssasnsssg...............kaaksaakskksqksaasalnlakesrakarararertrekmriknk 135
                               g               ++++ ++  k++ k+  +++ lake r++ar+rarertrekmr++ +
  C.cajan_43747 209 -----------GvssvdevvvsggreqQEERVDKVVKRKVKHCRAFHPLAKECRERARERARERTREKMRTRGV 271
                    ...........02333344444455543334444455555555668************************9876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036344.6E-42115268IPR005333Transcription factor, TCP
PROSITE profilePS5136932.437117175IPR017887Transcription factor TCP subgroup
PROSITE profilePS5137010.756248265IPR017888CYC/TB1, R domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:2000032Biological Processregulation of secondary shoot formation
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MQSQTSSDTF FLSHNGNDQI SYYDPAFFYT RPFTIDSQSK PTSKQENNYH DLPSPPPLSF  60
FHFPSPPFEE TQFFLQQHHD FLLQSHHQAQ PQATEPEPFM EASVRSSDQI PRKRTGKRDR  120
HSKINTARGL RDRRMRLSLE VAKRFFGLQD MLGFDKASKT VEWLLNQAKD EINRVAREKK  180
KDKKKNHDDD HNCGAKSGAS SSSSECEEGV SSVDEVVVSG GREQQEERVD KVVKRKVKHC  240
RAFHPLAKEC RERARERARE RTREKMRTRG VLLSDESTKC GEETNQDLTQ LGSWNPFESG  300
TKTHSVHSSL DVIITEAKEH PKEHLETHVQ AMAHDDDDDD SLVILNKWSP SLIFNGSGFS  360
HEVSLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1252264RARERARERTREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_43747
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029125603.10.0transcription factor DICHOTOMA-like
RefseqXP_029125604.10.0transcription factor DICHOTOMA-like
TrEMBLA0A151R0V70.0A0A151R0V7_CAJCA; Transcription factor TCP18
STRINGXP_007138340.11e-126(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65642851
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.21e-26TCP family protein