PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_43235
Common NameKK1_042786
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 346aa    MW: 38612.9 Da    PI: 7.2211
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_43235genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.92.1e-174695255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                   +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  C.cajan_43235 46 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 95
                   59*******.**********93....35999**********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.8E-2946102IPR001471AP2/ERF domain
SuperFamilySSF541714.05E-2146103IPR016177DNA-binding domain
PROSITE profilePS5103222.08946103IPR001471AP2/ERF domain
SMARTSM003801.3E-3346109IPR001471AP2/ERF domain
PfamPF008478.4E-114695IPR001471AP2/ERF domain
CDDcd000185.88E-3046102No hitNo description
PRINTSPR003671.8E-94758IPR001471AP2/ERF domain
PRINTSPR003671.8E-96985IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009733Biological Processresponse to auxin
GO:0009880Biological Processembryonic pattern specification
GO:0048825Biological Processcotyledon development
GO:0051726Biological Processregulation of cell cycle
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MEDALRRLNG MTPIQEPDAV ADHPHPKKSA AKRTVREAPT SGTAMRYRGV RRRPWGRYAA  60
EIRDPQSKER RWLGTFDTAE EAACAYDCAA RAMRGVKART NFVYPDAPDP HLFQPYNVPK  120
HCHVTRFVPN HSLGGADFSS SSSSTHHNHN PSSLNMLLFR DFLNSSSSQH FHSKTALAPA  180
SSYVNSSSLP SPTEVAESID EDLGLGFFPR ESSDSGLLEE IVHKFLPKTK PNKTGETSLR  240
HETLSISEPF PQTVSDYVAV SATKGYGDAK MRFPKIDGFG VSYDSPMQQF DTLNGFNPVQ  300
GVTIERDNNS NNYQYMMNHF PGCSNLEDIL QYPELFNSFA ARMQNA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-18461021471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_43235
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM9804501e-42KM980450.1 Betula platyphylla ethylene response factor protein 6 (ERF6) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020205829.10.0ethylene-responsive transcription factor ESR2
TrEMBLA0A151R0T10.0A0A151R0T1_CAJCA; Ethylene-responsive transcription factor ESR2
STRINGXP_007153786.11e-149(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41003256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12980.12e-16ERF family protein