PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_42237
Common NameKK1_041429
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 247aa    MW: 27319.7 Da    PI: 4.5072
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_42237genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.1e-182574255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   +y GVr+++ +gr++AeIrdp +   + r++lg+f+taeeAa a+++a+++++g
  C.cajan_42237 25 RYLGVRRRP-WGRYAAEIRDPAT---KERHWLGTFDTAEEAALAYDRAARAMRG 74
                   588******.**********843...4*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.7E-322588IPR001471AP2/ERF domain
PROSITE profilePS5103221.1532582IPR001471AP2/ERF domain
CDDcd000184.24E-312581No hitNo description
Gene3DG3DSA:3.30.730.106.8E-292581IPR001471AP2/ERF domain
SuperFamilySSF541714.18E-212582IPR016177DNA-binding domain
PfamPF008475.3E-122674IPR001471AP2/ERF domain
PRINTSPR003679.0E-92637IPR001471AP2/ERF domain
PRINTSPR003679.0E-94864IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009739Biological Processresponse to gibberellin
GO:0010030Biological Processpositive regulation of seed germination
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MNPRVTTSSK AKKKAEESQT AWGGRYLGVR RRPWGRYAAE IRDPATKERH WLGTFDTAEE  60
AALAYDRAAR AMRGSRARTN FVYADTTPGS SVTPILSPDQ PPLIQPDPLL TVDPFSLLGI  120
PSGSCSYGYE HERASASVAS SQFSQQVFFT DNNNINDNDI NNNNNNNNNN NKESGNTIEL  180
PPLPPDITSS MGYETEQGYG FYNSDISGFN YNYVEDNYSL SPMFGAMAEN VDAGSQVYDF  240
GSSSYFF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A7e-212681359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00509DAPTransfer from AT5G13910Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_42237
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029125445.10.0ethylene-responsive transcription factor LEP
TrEMBLA0A151R4520.0A0A151R452_CAJCA; Ethylene-responsive transcription factor LEP
STRINGXP_007161805.18e-98(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39043161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.13e-23ERF family protein