PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_42082
Common NameKK1_041848
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 480aa    MW: 53801.1 Da    PI: 5.3579
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_42082genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM106.33.7e-3378251127
            NAM  51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                    +++++ ew+fF++rd+ky++g+r nrat++gyWkatgkd++++s +++l+g+kktLvfy+grapkg++t+Wvmheyr
  C.cajan_42082   7 IRNKDPEWFFFCPRDRKYPNGQRLNRATNHGYWKATGKDRNIKS-GTNLIGMKKTLVFYTGRAPKGKRTNWVMHEYR 82 
                    567788**************************************.99*****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100539.961106IPR003441NAC domain
SuperFamilySSF1019416.93E-398106IPR003441NAC domain
PfamPF023652.3E-161182IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
MPDLSVIRNK DPEWFFFCPR DRKYPNGQRL NRATNHGYWK ATGKDRNIKS GTNLIGMKKT  60
LVFYTGRAPK GKRTNWVMHE YRPTLKELDG TNPGQSAFVL CRLFKKQDEN LEVSPCEEAE  120
ELQSDLAVAA VSPSQVTEDD KDQLTIPANS GEAISSIATP HDACDAQTQI VAPAAEVFPP  180
LNFDIYNDPK YELLDDRVFS PVLAHIQPEF NYPANNELDG QFGLQYGTNE TYISDFLNSV  240
VNWDQFPCEE PKYQQQQSYP SFNVNDNALG SDIDAELANM TCMQVSNVEE QKSNVGLFLN  300
NSDIAFSDVG MGQVYNVFND YEQPRIYNTV ASGDTGIITR PRKVPYEHLS TNSTQGTAQR  360
RIRLSTNTHG SYRMVKSGSC AQKELTSKPI IDVEEKASEN HASDESAILT PESTSNRKIH  420
RQGTKGGSTW GLKDILLLRR VPYISKSSSN RTTCSSVFVV SAFVVVILVA FTDIWGYLKF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A6e-30110762166NO APICAL MERISTEM PROTEIN
1ut4_B6e-30110762166NO APICAL MERISTEM PROTEIN
1ut7_A6e-30110762166NO APICAL MERISTEM PROTEIN
1ut7_B6e-30110762166NO APICAL MERISTEM PROTEIN
3swm_A6e-30110765169NAC domain-containing protein 19
3swm_B6e-30110765169NAC domain-containing protein 19
3swm_C6e-30110765169NAC domain-containing protein 19
3swm_D6e-30110765169NAC domain-containing protein 19
3swp_A6e-30110765169NAC domain-containing protein 19
3swp_B6e-30110765169NAC domain-containing protein 19
3swp_C6e-30110765169NAC domain-containing protein 19
3swp_D6e-30110765169NAC domain-containing protein 19
4dul_A6e-30110762166NAC domain-containing protein 19
4dul_B6e-30110762166NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_42082
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020205163.10.0NAC domain-containing protein 62
TrEMBLA0A151R3520.0A0A151R352_CAJCA; NAC domain-containing protein 78
STRINGGLYMA04G40450.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55513353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49530.14e-64NAC domain containing protein 62