PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_41807
Common NameKK1_042234
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family G2-like
Protein Properties Length: 174aa    MW: 20183.2 Da    PI: 9.4432
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_41807genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.22.5e-301871255
        G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                   prlrWtpeLHe Fve+ve LGG++kAtPk+il++m+vkgL ++h+kSHLQ+YR 
  C.cajan_41807 18 PRLRWTPELHEYFVEVVEGLGGKNKATPKSILQMMHVKGLRISHIKSHLQMYRN 71
                   9****************************************************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.1361474IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.6E-271471IPR009057Homeodomain-like
SuperFamilySSF466895.91E-151671IPR009057Homeodomain-like
TIGRFAMsTIGR015576.4E-231772IPR006447Myb domain, plants
PfamPF002494.7E-81970IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MKNSKKTGVR KYHKSDNPRL RWTPELHEYF VEVVEGLGGK NKATPKSILQ MMHVKGLRIS  60
HIKSHLQMYR NIKGHSILTS MHQEMEGNEH VNDIPMCSNC SSQRSQENKV RASKYDTGIN  120
QEIYPLDNKG FSQTSETDYD LNQVLYILIY YLIYHTCLLI SLALAIQSFQ VLKH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A2e-191973357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-191973357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-191973357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-191973357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_41807
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150384e-38AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020205397.11e-104probable transcription factor KAN3
TrEMBLA0A151R2B41e-127A0A151R2B4_CAJCA; Putative Myb family transcription factor At1g14600 family
STRINGXP_007146259.19e-82(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF91862839
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.11e-25G2-like family protein