PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_41411
Common NameKK1_042664
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 110aa    MW: 12494.4 Da    PI: 10.137
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_41411genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.39.4e-191664355
            AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   y+GVr++  +g++vAeIrd ++    +k ++lg+f +a +Aaka++ a+ +++g
  C.cajan_41411 16 YRGVRRRQ-WGKYVAEIRDpFK----KKCVWLGTFNSAIDAAKAYDVAAIQIRG 64
                   9****887.**********662....5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103221.3251573IPR001471AP2/ERF domain
SMARTSM003804.5E-321579IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.0E-281673IPR001471AP2/ERF domain
CDDcd000186.20E-291674No hitNo description
SuperFamilySSF541718.5E-201674IPR016177DNA-binding domain
PRINTSPR003675.3E-81627IPR001471AP2/ERF domain
PfamPF008475.9E-111664IPR001471AP2/ERF domain
PRINTSPR003675.3E-83854IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    Send to blast
MAPSESKKVH VEKVPYRGVR RRQWGKYVAE IRDPFKKKCV WLGTFNSAID AAKAYDVAAI  60
QIRGPDKAKT NFPIPPSHLL TCSTTHHQTH SKQTLILDLD LNQYPAQEIP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-171674664ATERF1
3gcc_A3e-171674664ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the regulation of gene expression by abscisic acid, stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Part of a transcriptional repressor complex including a histone deacetylase. {ECO:0000269|PubMed:11487705, ECO:0000269|PubMed:15994908}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_41411
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020205754.11e-78ethylene-responsive transcription factor 4
SwissprotQ9LDE42e-24ERF83_ARATH; Ethylene-responsive transcription factor 7
TrEMBLA0A151R0U33e-77A0A151R0U3_CAJCA; Ethylene-responsive transcription factor 7
STRINGGorai.009G443400.14e-24(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.13e-17ethylene responsive element binding factor 3
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Galuschka C,Schindler M,Bülow L,Hehl R
    AthaMap web tools for the analysis and identification of co-regulated genes.
    Nucleic Acids Res., 2007. 35(Database issue): p. D857-62
    [PMID:17148485]
  3. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  4. Giuntoli B,Perata P
    Group VII Ethylene Response Factors in Arabidopsis: Regulation and Physiological Roles.
    Plant Physiol., 2018. 176(2): p. 1143-1155
    [PMID:29269576]