PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_41231 | ||||||||
Common Name | KK1_043288 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | MYB_related | ||||||||
Protein Properties | Length: 127aa MW: 14771.9 Da PI: 8.4829 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27 | 1.1e-08 | 20 | 58 | 9 | 47 |
HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 d l++ + k++G++ Wk Ia+++ +++t q+ s+ qk+ C.cajan_41231 20 DRLFILGLKRFGKRKWKDIAQKVLLTKTKTQIASHAQKF 58 679999*******************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
TIGRFAMs | TIGR01557 | 1.5E-9 | 20 | 62 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 6.5E-6 | 20 | 57 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 7.47E-5 | 20 | 59 | No hit | No description |
SuperFamily | SSF46689 | 2.17E-7 | 20 | 63 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 8.9E-5 | 20 | 54 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence Send to blast |
MIEVGIKSFK YLHSFLLFCD RLFILGLKRF GKRKWKDIAQ KVLLTKTKTQ IASHAQKFFL 60 RKTSAKIRGN IHDLTLDDDA GFEYDQQNRE ITGSLSNNLV QHLIDEHSQN EQLEEEPSPT 120 FEAYSVL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_41231 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A151QZF8 | 7e-89 | A0A151QZF8_CAJCA; Myb-like protein J |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF16777 | 4 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 1e-17 | MYB family protein |