PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_41097 | ||||||||
Common Name | KK1_044049 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | C2H2 | ||||||||
Protein Properties | Length: 164aa MW: 18153.1 Da PI: 10.4014 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 10.8 | 0.0016 | 39 | 61 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C C++ Fs+ L H +H C.cajan_41097 39 FECRTCNRKFSSFQALGGHRASH 61 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 13.6 | 0.0002 | 80 | 102 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++Cg++Fs L H+++H C.cajan_41097 80 HDCSICGQRFSLGQALGGHMKRH 102 56********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13912 | 3.2E-10 | 39 | 63 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.33 | 39 | 61 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 10.242 | 39 | 66 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 3.62E-8 | 39 | 102 | No hit | No description |
PROSITE pattern | PS00028 | 0 | 41 | 61 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 1.6E-8 | 79 | 103 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 9.349 | 80 | 102 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.26 | 80 | 102 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 82 | 102 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence Send to blast |
MKRLREGVAN IDLGNCLMLL AQSQPRESKP QKLLGPVEFE CRTCNRKFSS FQALGGHRAS 60 HKKPKLEGKI LRLGNKPKTH DCSICGQRFS LGQALGGHMK RHRVANNEGD ISSINEAEVV 120 AKVPVVKRSN STRVLCLDLN LTPLQNDLNL LFGDKAPILV DLFT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in stress responses. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_41097 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020206674.1 | 1e-117 | zinc finger protein ZAT11 | ||||
Swissprot | Q9SLD4 | 2e-41 | ZAT11_ARATH; Zinc finger protein ZAT11 | ||||
TrEMBL | A0A151QXK4 | 1e-116 | A0A151QXK4_CAJCA; Zinc finger protein 1 | ||||
STRING | XP_007144472.1 | 1e-75 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF316 | 34 | 175 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37430.1 | 3e-39 | C2H2 family protein |