PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_41095 | ||||||||
Common Name | KK1_044047 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | C2H2 | ||||||||
Protein Properties | Length: 167aa MW: 18336.1 Da PI: 10.2509 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.6 | 0.00087 | 35 | 57 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs+ L H +H C.cajan_41095 35 FECKTCNRKFSSFQALGGHRASH 57 89**********99999998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.160.60 | 3.6E-4 | 31 | 53 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
SuperFamily | SSF57667 | 1.83E-9 | 34 | 105 | No hit | No description |
Pfam | PF13912 | 1.3E-11 | 34 | 59 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.19 | 35 | 57 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 9.91 | 35 | 62 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 37 | 57 | IPR007087 | Zinc finger, C2H2 |
Gene3D | G3DSA:3.30.160.60 | 0.001 | 79 | 105 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
SMART | SM00355 | 0.55 | 83 | 105 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 9.806 | 83 | 110 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 2.0E-9 | 83 | 107 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 85 | 105 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003676 | Molecular Function | nucleic acid binding | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence Send to blast |
MKREREKEGT TLESWDVTNC AMTPHASVST NPQVFECKTC NRKFSSFQAL GGHRASHKRV 60 RLGGEEQLGA GAKSMGLSGP KMHECSICGQ GFLMGQALGG HMRRHRDRGA TNKAFSSINE 120 VVAKVSVFKR SCNAKVFCLD LNLTPLENDF KLLLFGKVSP KVNLSSF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_41095 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020206675.1 | 1e-122 | zinc finger protein ZAT11 | ||||
TrEMBL | A0A151QXG0 | 1e-120 | A0A151QXG0_CAJCA; Zinc finger protein 1 | ||||
STRING | GLYMA13G19560.1 | 6e-78 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF316 | 34 | 175 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37430.1 | 9e-41 | C2H2 family protein |