PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_41094 | ||||||||
Common Name | KK1_044046 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | C2H2 | ||||||||
Protein Properties | Length: 162aa MW: 18189.2 Da PI: 9.9923 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 10.6 | 0.0018 | 40 | 62 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs+ L H +H C.cajan_41094 40 FECKTCKRKFSSFQALGGHRASH 62 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 12.9 | 0.00034 | 82 | 104 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg+ F L H+r+H C.cajan_41094 82 HECSICGMEFALGQALGGHMRKH 104 78********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 3.52E-8 | 40 | 104 | No hit | No description |
Pfam | PF13912 | 7.4E-11 | 40 | 64 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.43 | 40 | 62 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 9.93 | 40 | 67 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 42 | 62 | IPR007087 | Zinc finger, C2H2 |
Gene3D | G3DSA:3.30.160.60 | 4.3E-4 | 80 | 106 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
PROSITE profile | PS50157 | 10.138 | 82 | 109 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 8.1E-9 | 82 | 106 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.09 | 82 | 104 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 84 | 104 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003676 | Molecular Function | nucleic acid binding | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence Send to blast |
MAVATLKRER ERESIELAQS LMLLSQTKKP LLDTLAPAEF ECKTCKRKFS SFQALGGHRA 60 SHKKPRLEAE EEKGPRRQPK MHECSICGME FALGQALGGH MRKHRGAVAD NNEGVIEKVP 120 VLKRSNSKRV LCLDLDLNLT PLENDLKLLF GNKAPRVDLS LF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in stress responses. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_41094 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020206676.1 | 1e-115 | zinc finger protein ZAT11 | ||||
Swissprot | Q9SLD4 | 4e-41 | ZAT11_ARATH; Zinc finger protein ZAT11 | ||||
TrEMBL | A0A151QXH2 | 1e-114 | A0A151QXH2_CAJCA; Zinc finger protein 1 | ||||
STRING | GLYMA13G19570.1 | 4e-77 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF316 | 34 | 175 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53600.1 | 1e-31 | C2H2 family protein |