PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_40890
Common NameKK1_039394
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Dof
Protein Properties Length: 363aa    MW: 37891.8 Da    PI: 8.9867
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_40890genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof121.92.2e-3882140361
         zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                    e+ +kcprC+stntkfCy+nnyslsqPr+fCkaCrryWt+GGalrnvPvGgg+r+nk+s
  C.cajan_40890  82 EAPQKCPRCESTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKRS 140
                    56789***************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-3365138IPR003851Zinc finger, Dof-type
PfamPF027012.2E-3284139IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.34885139IPR003851Zinc finger, Dof-type
PROSITE patternPS01361087123IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MVYTSIPAYI DPANWQQQQP NHQQPGNNTT ASSHLILPPP IQPPPPPPSQ PHGLGGNSTT  60
AGSIRPGSMA DRARMANIPM QEAPQKCPRC ESTNTKFCYF NNYSLSQPRH FCKACRRYWT  120
RGGALRNVPV GGGCRRNKRS RGTSGSNTRS PANSDRQTAS AGSASTTSGS SSADMVAGLG  180
GTGVPSSLRF MAPLHQLSDH HLGGGGGGEI GLNYGLNYGA ISGPVGGIGD LNFHIGSALS  240
GGGSMLSGLD QWRVPQTHQF PFLSGLEASS SHGLYPFEGG SGSDGYGGTP IKVSTSGVMS  300
QLASVKMEEN HHHHELGLPR QFLGSVNNNP NANEQYWSGG GGATSAWTDL SAFSSSSTTS  360
NAL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00295DAPTransfer from AT2G37590Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_40890
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020203217.10.0dof zinc finger protein DOF2.4
TrEMBLA0A151R9S40.0A0A151R9S4_CAJCA; Dof zinc finger protein DOF2.4
STRINGXP_007140287.11e-175(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65634143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02460.14e-43Dof family protein