PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_40518
Common NameKK1_042590
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Trihelix
Protein Properties Length: 377aa    MW: 42478.9 Da    PI: 8.073
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_40518genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix74.61.7e-23268342176
       trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 
                    rW++ ev+ Li++r+++e+++r   +k+  Wee+s++m+  g++rs+k+Ckekwen+nk+yk++  + kkr+  +s
  C.cajan_40518 268 RWPDVEVQSLITVRTSLEHKVRLMGSKGSIWEEISEAMHGMGYNRSAKKCKEKWENINKYYKRTVGSGKKRR-LNS 342
                    8***************************************************************99999874.444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.110.105.8E-2541118No hitNo description
CDDcd019582.17E-3141118No hitNo description
PfamPF145473.5E-2242118IPR027923Hydrophobic seed protein
SMARTSM004991.7E-443121IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
SuperFamilySSF476996.56E-1745117IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
Gene3DG3DSA:1.10.10.609.8E-5258324IPR009057Homeodomain-like
PROSITE profilePS500907.352261325IPR017877Myb-like domain
PfamPF138371.8E-17267339No hitNo description
CDDcd122031.22E-24267331No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MASNGFVSFA LLLCLNMLSY TLVNSTYVPV IPDPSVPYQK GTCPIDALKL GVCAKVLNLV  60
NVKLGSPPTL PCCNLIRGLA DLEVAACLYT ALQANVLGIN LNVPISLSVI LNNCGRKIID  120
FHSSLDAADE DEDDDNSSAS SEALGSRKRR RKTERKLEGF VKNLVTKVME KQELMHRQLV  180
EMIENKERER IKREEAWKHE EMERIRKDEE ARAQERSRNL ALISFIQNLL GHEIQIPQPV  240
EEACGKREED EVEVNAQKDL NNDSSNNRWP DVEVQSLITV RTSLEHKVRL MGSKGSIWEE  300
ISEAMHGMGY NRSAKKCKEK WENINKYYKR TVGSGKKRRL NSKTICGGGS VFFFMRLGVK  360
FELVLRICCG ADNCCPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1146150RKRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_40518
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020205698.21e-164trihelix transcription factor GTL1-like, partial
TrEMBLA0A151R1D10.0A0A151R1D1_CAJCA; 14 kDa proline-rich protein DC2.15
STRINGXP_007147613.11e-118(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF111123338
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47660.12e-43Trihelix family protein