PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_40405 | ||||||||
Common Name | KK1_043320 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | C2H2 | ||||||||
Protein Properties | Length: 160aa MW: 18058.9 Da PI: 8.7314 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.4 | 6e-06 | 11 | 33 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +C+k F++k +L H+r+H C.cajan_40405 11 FICCICKKDFPSKKSLYGHMRSH 33 89********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 3.8E-5 | 10 | 35 | No hit | No description |
Pfam | PF13912 | 7.2E-6 | 11 | 35 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 10.637 | 11 | 38 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.0069 | 11 | 33 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 13 | 33 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence Send to blast |
MLSVVTTCDK FICCICKKDF PSKKSLYGHM RSHSAANRKG IHPSTSMEEN KSYDHLNVGV 60 APDEEPKPKR LKMQPILHRT TDKDEEIVYG EEEIIAAQIL VSMSHDTWPC DVPFPRIKNN 120 EKGVSNSVVV EDIPSTSGVK VQVSQPKVRR LIVKLKNPYI |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_40405 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027368554.1 | 2e-25 | uncharacterized protein LOC113874531 | ||||
TrEMBL | A0A151QZH3 | 1e-115 | A0A151QZH3_CAJCA; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF9737 | 24 | 37 |