PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_40336
Common NameKK1_040331
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 501aa    MW: 53812 Da    PI: 6.2788
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_40336genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.46e-09318366355
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  C.cajan_40336 318 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 366
                    58*************************9....556*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.66E-11313370No hitNo description
SuperFamilySSF474596.28E-17313384IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.485315365IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-16316382IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.4E-6318366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.7E-10321371IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    Send to blast
MSDKEKFEVD RNEDPMSYSS GMHSDWRFGG AHLASSSVGL VGLGNSMNVN RGDLIGSSCS  60
SASMMDSFGP NYWDNPTSSQ NLGFCDINGG TSNTAGIRKD GFGFGRAGQD HHGALEMGWN  120
PANSMLPNGP GMFPHSLSQF PTDSGFIERA ARFSCFSGGN FGDMVNSYGI PQSMGLYAGS  180
GGTMHGARDA LAGHGLKSVT GGQPQESDMN VIEATKDVSP SGDSPMMEGT SGEPSTKGLN  240
SKKRKRSVQG VDNDKANGAP ELPSEGAKDN PENQQKRDQQ PTSTIKASGK NAKLGSQASD  300
PPKEEYIHVR ARRGQATNSH SLAERVRREK ISERMKFLQD LVPGCSKVTG KAVMLDEIIN  360
YVQSLQRQVE FLSMKLATVN PRLDFNIEGL LAKDILQQRP GPSSALGFPL DVSMAFPPLH  420
PSQPGLIHPI IPNMGNSSDI LQRTIHPQLP PLNGGFKEPN QLPEVWEDEL HNVVQMSFAA  480
TAPVSNQDVD GMHSPTNNPF L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1241246KKRKRS
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_40336
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150431e-153AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020203931.10.0transcription factor bHLH49
RefseqXP_020203932.10.0transcription factor bHLH49
TrEMBLA0A151R7D40.0A0A151R7D4_CAJCA; Transcription factor bHLH49
STRINGGLYMA01G09400.30.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF72493248
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.31e-116bHLH family protein