PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_40294
Common NameKK1_039183
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family TCP
Protein Properties Length: 297aa    MW: 33622.1 Da    PI: 10.6286
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_40294genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP148.25.5e-46241552133
            TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg...kaaks 93 
                    ++kkdrhski+T++g+RdRRvRls+e+a++fFdLqd+LGfdk+s+t+eWL++++k+aikel++++s++++e  ++ ssss+ s++s++    aa++
  C.cajan_40294  24 PAKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKRAIKELARSKSNNSEEGaKSFSSSSEYSSDSKSptlMAARE 119
                    68**************************************************************66666443322222222222222234455555 PP

            TCP  94 aakskksqksaasalnlakesrakarararertrekmrik 133
                     +k k+sqk++a    ++kesr+karararert++k + +
  C.cajan_40294 120 RMKLKRSQKEPA----KMKESREKARARARERTSNKIMCN 155
                    555555555555....999************999985544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.5E-3925152IPR005333Transcription factor, TCP
PROSITE profilePS5136935.9212684IPR017887Transcription factor TCP subgroup
PROSITE profilePS5137011.607134151IPR017888CYC/TB1, R domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048831Biological Processregulation of shoot system development
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MTKPNPSGGG APHYGISCFL AKKPAKKDRH SKIYTSQGLR DRRVRLSIEI ARKFFDLQDM  60
LGFDKASNTL EWLFNKSKRA IKELARSKSN NSEEGAKSFS SSSEYSSDSK SPTLMAARER  120
MKLKRSQKEP AKMKESREKA RARARERTSN KIMCNVNTNT GRVQQDLKKK CPAIENNHSQ  180
IMHQSRSPTH PHHLMGSEAP RDDFNVIEES IVIKRKLKPS LMSSSHHHHQ NLAIPKEPPC  240
FNNNSSEYHP FSNLSPNWDA NGSTGRSNFC AIASMNLSTG LQIFGKSWEE CTNPRLH
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00215DAPTransfer from AT1G67260Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_40294
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150441e-110AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020203021.10.0transcription factor DICHOTOMA
TrEMBLA0A151RAI50.0A0A151RAI5_CAJCA; Transcription factor TCP1
STRINGXP_007151756.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17383294
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.24e-29TCP family protein