PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_39141
Common NameKK1_040130
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 346aa    MW: 39476.6 Da    PI: 4.8331
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_39141genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM182.41.1e-5661331128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                    lppGfrFhPtdeelv +yL++k++g+++el ++i+evd+yk+ePwdLp k  + +++ ewyf+s+rd+ky++g+r+nrat++gyWkatgkd++v+s
  C.cajan_39141   6 LPPGFRFHPTDEELVAYYLERKITGRSIEL-DIIAEVDLYKCEPWDLPdKsFLPSKDMEWYFYSPRDRKYPNGSRTNRATQAGYWKATGKDRPVHS 100
                    79****************************.99**************96435566888************************************** PP

            NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +++ vg+kktLv+ykgrap+g +t+Wvmheyrl
  C.cajan_39141 101 -QKKPVGMKKTLVYYKGRAPHGIRTNWVMHEYRL 133
                    .999****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.58E-643157IPR003441NAC domain
PROSITE profilePS5100560.4136157IPR003441NAC domain
PfamPF023654.8E-297133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MAPMSLPPGF RFHPTDEELV AYYLERKITG RSIELDIIAE VDLYKCEPWD LPDKSFLPSK  60
DMEWYFYSPR DRKYPNGSRT NRATQAGYWK ATGKDRPVHS QKKPVGMKKT LVYYKGRAPH  120
GIRTNWVMHE YRLIESVPGA ALSSLKDSYS LCRIFKKTIQ IPAKPKEEEQ AEDAKKQSMW  180
ISEEQVLGED SSGTEISREM ETVDDKVLNH HEHPKFPCDA SSSDLTQGTC TPTDTGIAED  240
FQPHFACDEA NSAANSYTMG IGYPPSLFQD VEIPTYAGMH YQLPYTPLVL EDFPQINLPE  300
TKSTKPEMTD DCMLYDRYKD CMNGTLEEII SLCCTQDNSV PFPMLE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-59115712165NO APICAL MERISTEM PROTEIN
1ut4_B7e-59115712165NO APICAL MERISTEM PROTEIN
1ut7_A7e-59115712165NO APICAL MERISTEM PROTEIN
1ut7_B7e-59115712165NO APICAL MERISTEM PROTEIN
3swm_A8e-59115715168NAC domain-containing protein 19
3swm_B8e-59115715168NAC domain-containing protein 19
3swm_C8e-59115715168NAC domain-containing protein 19
3swm_D8e-59115715168NAC domain-containing protein 19
3swp_A8e-59115715168NAC domain-containing protein 19
3swp_B8e-59115715168NAC domain-containing protein 19
3swp_C8e-59115715168NAC domain-containing protein 19
3swp_D8e-59115715168NAC domain-containing protein 19
4dul_A7e-59115712165NAC domain-containing protein 19
4dul_B7e-59115712165NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00205DAPTransfer from AT1G54330Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_39141
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150401e-110AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020203799.10.0NAC domain-containing protein 96
TrEMBLA0A151R7X80.0A0A151R7X8_CAJCA; NAC domain-containing protein 78
STRINGGLYMA15G41825.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF105083341
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54330.12e-98NAC domain containing protein 20