PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_36762 | ||||||||
Common Name | KK1_041215 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | Nin-like | ||||||||
Protein Properties | Length: 345aa MW: 39238.9 Da PI: 4.8378 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 55.6 | 1e-17 | 296 | 342 | 3 | 49 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49 k ++led s yF+l+i +AA++L+vc ++LK CR+++++ WPhRk+ C.cajan_36762 296 KAMKLEDCSDYFHLTIGAAAQKLDVCISALKSLCRRNNLENWPHRKV 342 7899******************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 13.765 | 285 | 345 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 1.8E-15 | 298 | 342 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 345 aa Download sequence Send to blast |
MDNNNFGFVS YDDEDPFLCP LIPNLLVEVD PSLVLPKAQP HQQNDHPFGL QHGNNVPFTI 60 QDQFMQDNNN NGEVANFDVE SRGQQTMHVD GSNNISNEGG VGNFEIEGRG QTMHGDGSNN 120 IFNEGRVVTS VSYWPLIPRP FFCTCCQVLR QIIHTNGVQF EKLEIHGTIG VMGHAIIQNR 180 NITQGDHPSS DPHQIIDFHY RSTEQIKSFM VEYCTQMSKL GYIIVEDVLS TYYEILCTGV 240 DWAKDTSDED IDLIPSNDMG QDFEPEPQPQ HEPEPEAVNL KRKRRRPDAE QRKRIKAMKL 300 EDCSDYFHLT IGAAAQKLDV CISALKSLCR RNNLENWPHR KVPML |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 279 | 286 | LKRKRRRP |
2 | 280 | 285 | KRKRRR |
3 | 281 | 285 | RKRRR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_36762 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_029125407.1 | 0.0 | uncharacterized protein LOC114915208 | ||||
TrEMBL | A0A151R511 | 0.0 | A0A151R511_CAJCA; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7478 | 28 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35590.1 | 6e-09 | RWP-RK domain-containing protein |