PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_36390
Common NameKK1_039242
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family G2-like
Protein Properties Length: 346aa    MW: 38725 Da    PI: 9.5689
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_36390genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.33e-32166219255
        G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                    pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  C.cajan_36390 166 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 219
                    9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.77E-15163219IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-28164219IPR009057Homeodomain-like
TIGRFAMsTIGR015577.8E-24166219IPR006447Myb domain, plants
PfamPF002495.7E-7167218IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009944Biological Processpolarity specification of adaxial/abaxial axis
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MELFPAQPDL SLQISPPNTK PTSNSCFNLS LSNPKASDPN LIHHFQNGAN NNNSNSNSNN  60
NPFQPFQQNH YFHQPLFQPQ HHQSLSQDLG FLRPIRGIPV YQNPPPIPFT QHHHHHHHHL  120
PLEPSSTTPS SIISNTNSPS TPFHSQALMR SRFLSRFPAK RSMRAPRMRW TSTLHARFVH  180
AVELLGGHER ATPKSVLELM DVKDLTLAHV KSHLQMYRTV KTTDRAAASS GQSDVYDNGS  240
SGDTSDDLMF DIKSSRRSDL SIKQGRSSVN QDKDYHGLWG NNSREAWLHG KTKADSVGNV  300
HSLEKEMDPK CLSYERISDG SSSSNLSGSS PKKPNLDLEF SLGQPL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-17167221458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-17167221458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-17167221458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-17167221458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-17167221458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-17167221458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-17167221458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-17167221458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that regulates lateral organ polarity. Promotes abaxial cell fate during lateral organd formation. Functions with KAN1 in the specification of polarity of the ovule outer integument. {ECO:0000269|PubMed:11525739, ECO:0000269|PubMed:15286295, ECO:0000269|PubMed:16623911, ECO:0000269|PubMed:17307928}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00174DAPTransfer from AT1G32240Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_36390
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020203065.10.0probable transcription factor KAN2
SwissprotQ9C6169e-74KAN2_ARATH; Probable transcription factor KAN2
TrEMBLA0A151RAF20.0A0A151RAF2_CAJCA; Putative Myb family transcription factor At1g14600 family
STRINGXP_007158256.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF59683452
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.18e-75G2-like family protein
Publications ? help Back to Top
  1. Machida C,Nakagawa A,Kojima S,Takahashi H,Machida Y
    The complex of ASYMMETRIC LEAVES (AS) proteins plays a central role in antagonistic interactions of genes for leaf polarity specification in Arabidopsis.
    Wiley Interdiscip Rev Dev Biol, 2015 Nov-Dec. 4(6): p. 655-71
    [PMID:26108442]