PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_35897
Common NameKK1_037224
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Dof
Protein Properties Length: 295aa    MW: 31016.3 Da    PI: 8.5926
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_35897genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.91.1e-382481461
         zf-Dof  4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                   + +kcprCds+ntkfCyynnyslsqPr+fCk+CrryWt+GGalrnvP+Ggg+rknkk 
  C.cajan_35897 24 TVIKCPRCDSSNTKFCYYNNYSLSQPRHFCKTCRRYWTNGGALRNVPIGGGCRKNKKP 81
                   6789***************************************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-251580IPR003851Zinc finger, Dof-type
PfamPF027014.1E-332580IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.3942680IPR003851Zinc finger, Dof-type
PROSITE patternPS0136102864IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MAPPSDDMPP TPQAQEASQG PRNTVIKCPR CDSSNTKFCY YNNYSLSQPR HFCKTCRRYW  60
TNGGALRNVP IGGGCRKNKK PKPTTSSSQF SSFGDASGFQ LDPPPAAAAN PLMGLAPPSP  120
NLWALGQSQS PALPDPVTGS MQSVHGNLAS SIESLSNMNQ DMHMKMQQQR FAAMMFGGDS  180
GSGSSSQKSY GGGGGSGVSH SQTVGGFDIQ KPQPILFQNL EISKPQNLPG GGSGKGGAAS  240
ETVPLIPTEW FFDNPFSSVN PATASANGGN VNNGNQNDFN NWGGVHAWGN FNGLP
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_35897
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP6629211e-165KP662921.1 Cajanus cajan Dof36 (Dof36) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020240261.11e-148dof zinc finger protein DOF5.7
TrEMBLA0A151RFI90.0A0A151RFI9_CAJCA; Dof zinc finger protein DOF5.7
STRINGXP_007156457.11e-82(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF38543460
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37590.16e-33DNA binding with one finger 2.4