PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_34779
Common NameKK1_031916
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family AP2
Protein Properties Length: 401aa    MW: 45471.7 Da    PI: 9.3696
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_34779genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.45.6e-1173125855
            AP2   8 wdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                    +++++gr++A+++d  ++n    k+ k+++lg +  +e Aa+a++ a++k++g
  C.cajan_34779  73 RHRWTGRFEAHLWDkGTWNPtqkKKgKQVYLGAYNDEEAAARAYDLAALKYWG 125
                    899***********888854566447*************************98 PP
2AP252.31.4e-16168219155
            AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa+a++ a+ +++g
  C.cajan_34779 168 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 219
                    89****99**********99966...3.6*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103216.79267133IPR001471AP2/ERF domain
SMARTSM003801.1E-1773139IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-1273133IPR001471AP2/ERF domain
SuperFamilySSF541713.92E-1373134IPR016177DNA-binding domain
PfamPF008472.0E-773125IPR001471AP2/ERF domain
CDDcd000181.96E-25168229No hitNo description
SuperFamilySSF541716.47E-18168229IPR016177DNA-binding domain
PfamPF008475.0E-12168219IPR001471AP2/ERF domain
PROSITE profilePS5103218.953169227IPR001471AP2/ERF domain
SMARTSM003802.7E-26169233IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.4E-18169228IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MELTPVKSEL SPRSHRMLML DGSEVIATKC VKRRRRDSSL AVLGGNGQRG EQLEEQKQLG  60
GQSTATTVKR SSRHRWTGRF EAHLWDKGTW NPTQKKKGKQ VYLGAYNDEE AAARAYDLAA  120
LKYWGTSTFT NFPVPDYEKE LEIMKTVTKE EYLASLRRRS SGFSRGVSKY RGVARHHHNG  180
RWEARIGRVF GNKYLYLGTY STQEEAARAY DIAAIEYRGI NAVTNFDLST YIRWLRPGTH  240
SNISQDQKPS LDPHSFATSN SMQTRGNIEL SNTNMHSFPS GELDCTQKRD FSKYMTPLSP  300
CNKASSPTAL GLLLKSSVFR ELMQRNLNSS GEEAEEVELK YPRESNEEVG GIYDNDNTSN  360
SYFCSSSINR LPNLESSEES SLPMYHRTVQ SLWNGAFNMS N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19199PTQKKKGKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_34779
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2352350.0AC235235.1 Glycine max strain Williams 82 clone GM_WBb0028H01, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020235862.10.0AP2-like ethylene-responsive transcription factor At1g16060
TrEMBLA0A151RVE20.0A0A151RVE2_CAJCA; Ethylene-responsive transcription factor WRI1
STRINGGLYMA18G16236.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21983283
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.31e-66AP2 family protein