PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_34336 | ||||||||
Common Name | KK1_035764 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | bHLH | ||||||||
Protein Properties | Length: 206aa MW: 22885.2 Da PI: 8.4736 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37.1 | 5.6e-12 | 45 | 90 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h ++ErrRR+++ ++f L +P + K +Ka++L+ A++Y+k+L C.cajan_34336 45 DHIMAERRRRQELTERFIALSATIPGL-----NKTDKASVLRAAIDYVKEL 90 699***********************8.....6****************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 4.06E-17 | 39 | 101 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 6.61E-12 | 39 | 95 | No hit | No description |
PROSITE profile | PS50888 | 15.555 | 41 | 90 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 8.7E-17 | 45 | 102 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.7E-9 | 45 | 90 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 6.2E-15 | 47 | 96 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence Send to blast |
MVPATPEPSS NNSTTLPAKR ALGPEAVARP NQGAKKVRSS SQTVDHIMAE RRRRQELTER 60 FIALSATIPG LNKTDKASVL RAAIDYVKEL KEQIQELEKQ DKTRSLLKKR DPSNIPEIEA 120 RVLGKEVLIE IHCEKQNGIQ FILLDHLENL HLTVTASSVL PFGNSALSIT ITAQMGEAYK 180 MTVDDLVKNI RQVLPDSHVL SDSDPY |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_34336 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By ethylene (ACC) and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020239140.1 | 1e-149 | transcription factor bHLH18 | ||||
Swissprot | Q9T072 | 7e-35 | BH025_ARATH; Transcription factor bHLH25 | ||||
TrEMBL | A0A151RJU3 | 1e-149 | A0A151RJU3_CAJCA; Transcription factor bHLH25 | ||||
STRING | GLYMA07G03060.1 | 1e-107 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13110 | 12 | 30 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22750.2 | 1e-32 | bHLH family protein |