PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_34116
Common NameKK1_037155
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 458aa    MW: 51048.6 Da    PI: 9.1235
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_34116genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.6e-056789123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   + C+ C+k F r  nL+ H r H
  C.cajan_34116 67 FICEVCNKGFQRDQNLQLHRRGH 89
                   89*******************88 PP
2zf-C2H211.90.0007144166123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    ++C++C+k +  +s+ k H + +
  C.cajan_34116 144 WRCEKCSKKYAVQSDWKAHNKIC 166
                    58*****************8876 PP
3zf-C2H210.90.0015174192523
                    TTTEEESSHHHHHHHHHHT CS
        zf-C2H2   5 dCgksFsrksnLkrHirtH 23 
                    dCg+ Fsrk+++++H   +
  C.cajan_34116 174 DCGTIFSRKDSFVTHRAFC 192
                    9**************8765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576676.78E-76689No hitNo description
Gene3DG3DSA:3.30.160.607.6E-66689IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM003550.0266789IPR015880Zinc finger, C2H2-like
PfamPF121716.4E-56789IPR022755Zinc finger, double-stranded RNA binding
PROSITE profilePS5015710.8666789IPR007087Zinc finger, C2H2
PROSITE patternPS0002806989IPR007087Zinc finger, C2H2
SMARTSM00355180109139IPR015880Zinc finger, C2H2-like
Gene3DG3DSA:3.30.160.607.8E-4132165IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576676.78E-7139164No hitNo description
SMARTSM00355170144164IPR015880Zinc finger, C2H2-like
PROSITE profilePS500966.504443458IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0005515Molecular Functionprotein binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MMSQQAASVP SNLRPSSVQL HQPNSNPNPN PSSASSAKRK RSLPGTPDPN AEVIALSPKS  60
LMATNRFICE VCNKGFQRDQ NLQLHRRGHN LPWKLRQRAK EEEVRKKVYV CPEKSCVHHD  120
PCRALGDLTG IKKHFSRKHG EKKWRCEKCS KKYAVQSDWK AHNKICGTRQ YKCDCGTIFS  180
RKDSFVTHRA FCDAMAEQAA RVTSLPAVLS NEILMNAQGL QYSEFGGPGP EAFMGNLADA  240
AHHHEHKLKL PLWLDQANPH ALSVGSNSST VFSPGTTTTF PETNNMFGTP QWLNYRYPEA  300
SFNGANNVSV AQPQGVMKLE QEENKGELSH SVSSLFPFSH MESTRMSGNG SSAFDNSNTV  360
FGLLDPNNNR GNNVVDIQKM LFKQAHEGVN LNHMVNSLAS NNMNMVMPRI EEIMEKQLPY  420
SSSSNTEDQH LTKDFMGVGD GSMMGPMVNL QSKFRGHY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3h_C6e-35140205368Zinc finger protein JACKDAW
5b3h_F6e-35140205368Zinc finger protein JACKDAW
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
195106RQRAKEEEVRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_34116
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0979400.0BT097940.1 Soybean clone JCVI-FLGm-22B20 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020240224.10.0zinc finger protein BALDIBIS isoform X2
TrEMBLA0A151RFU50.0A0A151RFU5_CAJCA; Zinc finger protein JACKDAW
STRINGXP_007150215.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18134275
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G45260.11e-106C2H2-like zinc finger protein