PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_33584
Common NameKK1_031501
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GRF
Protein Properties Length: 383aa    MW: 43555.5 Da    PI: 8.9561
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_33584genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC77.81.1e-2476119144
            WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 
                    d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e
  C.cajan_33584  76 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 119
                    79***************************************987 PP

2QLQ55.22.1e-19842236
            QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
                   +FT++Q+q+L++Q+l+yKy+a++  +Pp+Ll+ i+
  C.cajan_33584  8 PFTPSQWQELEHQALIYKYMASGITIPPDLLFTIK 42
                   8******************************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009511.7E-11743IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088801.2E-14841IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166622.152843IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166724.9876120IPR014977WRC domain
PfamPF088791.4E-2077119IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MNGRNRFPFT PSQWQELEHQ ALIYKYMASG ITIPPDLLFT IKRSYFDSPL SSRLLPSQPQ  60
HFGWNYLQMG LGRKIDPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG KNRSRKPVEV  120
LKTTASTTTS NTNAASTHAI SSITKNSNTL SPLASSETHQ HSCYGSFLYH HPPSRSSGIG  180
LSFEDNNSTP LFLDTGSCSQ SNTDCRSRYV YGEKEEVDEH AFFTEPCGVM KSFSASSMDE  240
PWQLAPLTMS SSSSSSKQRS SFGLSNDYSC LQLQSHSKQQ EQQDQGNCYM LSGQRGKEEP  300
QKTVHRFFDE WPHKGREASW LDLDDKSSTT QLSISIPTSH DFPTFSSRTH HGNCQFNFHI  360
LANYFGSSLF QMKKIKKRKL CSP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1372379KKIKKRKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_33584
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150351e-129AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020235539.10.0growth-regulating factor 6
TrEMBLA0A151RWD60.0A0A151RWD6_CAJCA; Uncharacterized protein
STRINGXP_007138669.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40433459
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13960.16e-48growth-regulating factor 5