PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_33584 | ||||||||
Common Name | KK1_031501 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | GRF | ||||||||
Protein Properties | Length: 383aa MW: 43555.5 Da PI: 8.9561 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 77.8 | 1.1e-24 | 76 | 119 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e C.cajan_33584 76 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 119 79***************************************987 PP | |||||||
2 | QLQ | 55.2 | 2.1e-19 | 8 | 42 | 2 | 36 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FT++Q+q+L++Q+l+yKy+a++ +Pp+Ll+ i+ C.cajan_33584 8 PFTPSQWQELEHQALIYKYMASGITIPPDLLFTIK 42 8******************************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00951 | 1.7E-11 | 7 | 43 | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
Pfam | PF08880 | 1.2E-14 | 8 | 41 | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
PROSITE profile | PS51666 | 22.152 | 8 | 43 | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
PROSITE profile | PS51667 | 24.98 | 76 | 120 | IPR014977 | WRC domain |
Pfam | PF08879 | 1.4E-20 | 77 | 119 | IPR014977 | WRC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005524 | Molecular Function | ATP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 383 aa Download sequence Send to blast |
MNGRNRFPFT PSQWQELEHQ ALIYKYMASG ITIPPDLLFT IKRSYFDSPL SSRLLPSQPQ 60 HFGWNYLQMG LGRKIDPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG KNRSRKPVEV 120 LKTTASTTTS NTNAASTHAI SSITKNSNTL SPLASSETHQ HSCYGSFLYH HPPSRSSGIG 180 LSFEDNNSTP LFLDTGSCSQ SNTDCRSRYV YGEKEEVDEH AFFTEPCGVM KSFSASSMDE 240 PWQLAPLTMS SSSSSSKQRS SFGLSNDYSC LQLQSHSKQQ EQQDQGNCYM LSGQRGKEEP 300 QKTVHRFFDE WPHKGREASW LDLDDKSSTT QLSISIPTSH DFPTFSSRTH HGNCQFNFHI 360 LANYFGSSLF QMKKIKKRKL CSP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 372 | 379 | KKIKKRKL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_33584 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015035 | 1e-129 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020235539.1 | 0.0 | growth-regulating factor 6 | ||||
TrEMBL | A0A151RWD6 | 0.0 | A0A151RWD6_CAJCA; Uncharacterized protein | ||||
STRING | XP_007138669.1 | 0.0 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4043 | 34 | 59 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 6e-48 | growth-regulating factor 5 |