PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_33553
Common NameKK1_037475
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family TALE
Protein Properties Length: 296aa    MW: 34182.7 Da    PI: 4.9605
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_33553genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox30.65.7e-102382722155
                    HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
       Homeobox  21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 
                    + +yp++ee+ +L++ +gL+++q+ +WF N+R ++
  C.cajan_33553 238 RWPYPTEEEKVQLSEMTGLDQKQINNWFINQRKRH 272
                    469*****************************885 PP
2ELK37.35.9e-13192213122
            ELK   1 ELKhqLlrKYsgyLgsLkqEFs 22 
                    ELK++LlrKY+gyL+sL++EF+
  C.cajan_33553 192 ELKEMLLRKYGGYLSSLRKEFL 213
                    9********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM012558.4E-164993IPR005540KNOX1
PfamPF037901.2E-175191IPR005540KNOX1
SMARTSM012561.8E-2596147IPR005541KNOX2
PfamPF037916.7E-2499146IPR005541KNOX2
SMARTSM011885.0E-7192213IPR005539ELK domain
PfamPF037894.4E-10192213IPR005539ELK domain
PROSITE profilePS5121311.366192212IPR005539ELK domain
PROSITE profilePS5007112.665212275IPR001356Homeobox domain
SuperFamilySSF466892.78E-20214286IPR009057Homeodomain-like
SMARTSM003891.5E-13214279IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.606.8E-28217277IPR009057Homeodomain-like
CDDcd000864.82E-12224276No hitNo description
PfamPF059206.2E-18232271IPR008422Homeobox KN domain
PROSITE patternPS000270250273IPR017970Homeobox, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MEDFYKLNPL LSCPEDVVRE VNVTAASELN LGLVANNFLH LQHPQTSDRF IKTQISTHPL  60
FPNLVSAYID CRKVGAPPEL ASILEEISCE RHSTDSVREI GDDPELDEFM ESYCEVLHRY  120
KQELSKPFNE ATLFLCNIES QLSNLCKGTL TMPLENNRSD EAAGTSEDEL NWEKVEAVEG  180
YESSAPRPGD QELKEMLLRK YGGYLSSLRK EFLKKRKKGK LPKDARMILM DWWNAHYRWP  240
YPTEEEKVQL SEMTGLDQKQ INNWFINQRK RHWKPSEDMR FAIMDGVSGS NIGQTM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1207216LRKEFLKKRK
2213217KKRKK
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in shoot formation during early embryogenesis. {ECO:0000269|PubMed:10488233}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_33553
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020240439.10.0homeobox protein knotted-1-like 1
SwissprotQ9FP292e-94KNOS1_ORYSJ; Homeobox protein knotted-1-like 1
TrEMBLA0A151RF430.0A0A151RF43_CAJCA; Homeobox protein knotted-1-like 1
STRINGGLYMA20G22986.11e-177(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF62034125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G23380.13e-78KNOTTED1-like homeobox gene 6
Publications ? help Back to Top
  1. Park SH, et al.
    A Ds-insertion mutant of OSH6 (Oryza sativa Homeobox 6) exhibits outgrowth of vestigial leaf-like structures, bracts, in rice.
    Planta, 2007. 227(1): p. 1-12
    [PMID:17624547]