PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_33271 | ||||||||
Common Name | KK1_035519 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | Dof | ||||||||
Protein Properties | Length: 248aa MW: 26667.5 Da PI: 9.1792 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 46 | 1.1e-14 | 33 | 61 | 36 | 63 |
zf-Dof 36 C.rryWtkGGalrnvPvGggrrknkksss 63 C rryWt+GG+lrn+PvGgg+rknk+sss C.cajan_33271 33 CpRRYWTEGGSLRNIPVGGGSRKNKRSSS 61 549**********************9875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-7 | 19 | 52 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 6.3E-9 | 33 | 58 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence Send to blast |
MVVKPIEDIV VTNTCPKGVE KKARPQKEQA LNCPRRYWTE GGSLRNIPVG GGSRKNKRSS 60 SSSTPNNKKL NVPDLVISPP TLSHTQNPKN NNNVHQGQDL NLAFPATVPD FRNISELVQQ 120 NNNNNSSNSN MSASVSASSS SSTTTTTPAT TASHLSAMEL LSGITSSSTA DPNSVYTCGF 180 PLQDFKPTLN FSLDGYASLH NVQSGRLLFP FEDLKQVSNT TTTTTPMDQK QQGDSTGYWT 240 GMLGGGSW |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_33271 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020238895.1 | 1e-132 | dof zinc finger protein DOF4.6 isoform X1 | ||||
TrEMBL | A0A151RKH8 | 0.0 | A0A151RKH8_CAJCA; Dof zinc finger protein DOF4.6 | ||||
STRING | GLYMA20G35910.1 | 1e-109 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF674 | 34 | 137 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46590.2 | 1e-14 | Dof family protein |