PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_33214
Common NameKK1_034426
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 416aa    MW: 45902.6 Da    PI: 6.3783
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_33214genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.91.2e-053053431154
                    HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  C.cajan_33214 305 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKLL 343
                    5778999**********998.....8****************88 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.233294343IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.63E-6304347No hitNo description
SuperFamilySSF474591.19E-10304358IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.9E-8308350IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MGDDEFQASG NWWDTARNVS GASQSSSSPI TNFDSATSTD PNLHMMALGL SSQAMDWNQA  60
SLLRGDQKGP ENSFRSMLQE NLGSSRANFQ QETGMGLSQQ VQWRSEKMFS VESSSNEFKQ  120
VNRGFSLDQS QFSPQYSSGD STVTSQGLPS SNFQMDSSAL YGNPSMLQGL LEPDNNNQPH  180
QQQPSMSFPY PTSYGLNSNE LVPSWSKVPQ FLRASPPKQP LNNQLHFTNN APFWNASEPA  240
NIKDVRSNSS FPSLQPPFST PYFEVQSKNI SEVRDSGTVV KKSGNEPAPK RTRNETPSPL  300
PAFKVRKEKM GDRITALQQL VSPFGKTDTA SVLSEAIEYI KLLHEQVTTF STPYMKSGAP  360
IQTQQNSGKS KEAEGPKQDL RSRGLCLVPV SSTFPVTHET TFDFWTPTPT YGGTSR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_33214
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150401e-171AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020237977.10.0transcription factor bHLH123 isoform X1
RefseqXP_020237980.10.0transcription factor bHLH123 isoform X1
RefseqXP_029131016.10.0transcription factor bHLH123 isoform X1
SwissprotQ8GXT31e-80BH123_ARATH; Transcription factor bHLH123
TrEMBLA0A151RNI80.0A0A151RNI8_CAJCA; Transcription factor bHLH123 family
STRINGXP_007149667.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF111833106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.16e-81bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]