PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_32923
Common NameKK1_037593
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GRAS
Protein Properties Length: 440aa    MW: 49643.8 Da    PI: 6.6759
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_32923genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS338.89.3e-104354393374
           GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                    + L +cA++++sg+  +a++ L  + ++asp+gd+mqR+a+y+ e+La +++++ +++ ka++ s+t   ++see ++ + f+++ P+lk+s+ ++
  C.cajan_32923  35 RILNACAKFIESGSIMNADTGLDYIAHIASPYGDAMQRVATYISEGLACQVLKNLHGVPKAINLSKTM--STSEEQFVKRSFFNLYPFLKVSYEIT 128
                    7899**********************************************************999987..5788888999**************** PP

           GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                     +aI ea+ege+ +HiiD+++s G QW  L+q L + ++++psl+iTg+++    +ke l ++  +L+  Ae+l+ +++fn+ ++++le+l+l+eL
  C.cajan_32923 129 SHAIAEAMEGEKLIHIIDLSASDGHQWTYLMQRLKESQKKTPSLKITGIHE----KKEILDQVDTQLRVEAENLKFHIQFNA-IVSTLENLDLREL 219
                    ***************************************************....9**************************.79*********** PP

           GRAS 195 rvkpgEalaVnlvlqlhrll.............................................desvsleserdevLklvkslsPkvvvvveqe 245
                     + +gE la+++vlqlh+ll                                             ++s+++ +    +L+ +++l+P+v+v++eqe
  C.cajan_32923 220 PIMKGEPLAISSVLQLHTLLaadvttvgstsspaesmhqrtfaeilgkqktnpssnssllqlplyASSTKILH----FLNDLWKLQPRVMVITEQE 311
                    ***********************************************************98777666666666....******************* PP

           GRAS 246 adhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklll 341
                    ++ n++s+ er+ +al++y alf++le++++++  eri +Er llg+ei+n+vac g+er+erhe+le+W  r+e aGF + ++s++  +qa   l
  C.cajan_32923 312 SNVNGSSLTERVDKALDFYGALFNCLESTVSTTPIERIIMERTLLGEEIKNIVACDGDERKERHEKLETWIPRIELAGFCKGHISHHGKMQATKQL 407
                    ************************************************************************************************ PP

           GRAS 342 rkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                    + ++ +gy+v +e+++l+ +W+d+pL+svS W+
  C.cajan_32923 408 HGYG-KGYKVFQENNCLFVCWNDKPLFSVSTWT 439
                    ***9.9**************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098544.7817420IPR005202Transcription factor GRAS
PfamPF035143.2E-10135439IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
FFTNFSDKAD SYILDSPYPW LKDMNGEDRG KYLARILNAC AKFIESGSIM NADTGLDYIA  60
HIASPYGDAM QRVATYISEG LACQVLKNLH GVPKAINLSK TMSTSEEQFV KRSFFNLYPF  120
LKVSYEITSH AIAEAMEGEK LIHIIDLSAS DGHQWTYLMQ RLKESQKKTP SLKITGIHEK  180
KEILDQVDTQ LRVEAENLKF HIQFNAIVST LENLDLRELP IMKGEPLAIS SVLQLHTLLA  240
ADVTTVGSTS SPAESMHQRT FAEILGKQKT NPSSNSSLLQ LPLYASSTKI LHFLNDLWKL  300
QPRVMVITEQ ESNVNGSSLT ERVDKALDFY GALFNCLEST VSTTPIERII MERTLLGEEI  360
KNIVACDGDE RKERHEKLET WIPRIELAGF CKGHISHHGK MQATKQLHGY GKGYKVFQEN  420
NCLFVCWNDK PLFSVSTWTV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3h_A3e-37164391378Protein SCARECROW
5b3h_D3e-37164391378Protein SCARECROW
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_32923
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007149008.10.0hypothetical protein PHAVU_005G032800g
TrEMBLA0A151REM60.0A0A151REM6_CAJCA; Scarecrow-like protein 3 (Fragment)
STRINGXP_007149008.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF145191017
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.11e-126scarecrow-like 3