PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_32438
Common NameKK1_032194
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GRF
Protein Properties Length: 505aa    MW: 55947.3 Da    PI: 8.7831
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_32438genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC771.9e-24199243145
            WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                    d+epgrCrRtDGKkWRCsr+++ ++k+CErH++rgr+rsrk++e 
  C.cajan_32438 199 DPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEG 243
                    79****************************************985 PP
2QLQ621.6e-21130165237
            QLQ   2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 
                     FT++Q+++L++Q+l+yKy+ an+PvP++Ll +i+k
  C.cajan_32438 130 LFTPSQWMELEHQALIYKYITANVPVPSHLLIPIRK 165
                    6*********************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009512.1E-12129165IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166623.788130165IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088801.2E-15131164IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166725.847199243IPR014977WRC domain
PfamPF088799.6E-21200242IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0008285Biological Processnegative regulation of cell proliferation
GO:0048364Biological Processroot development
GO:0048366Biological Processleaf development
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    Send to blast
WVWRGWTVLL PLVVHLLLQI LRQSTSDDGD EWRASKVAKT HDMSSASSKA MLFHHRNSLL  60
RSNAATLFSD HHHSQMLSFS SPKSETLLLD NKPSSNATLP FSLSSNYNRS TGYNSGSNSM  120
HGALVGAIGL FTPSQWMELE HQALIYKYIT ANVPVPSHLL IPIRKALDSA SFCNFSTGLL  180
RPNTLGWGGF HLGFSNNTDP EPGRCRRTDG KKWRCSRDAV VDQKYCERHM NRGRHRSRKP  240
VEGQSGHALN TTTTPNASSN SIVVPGNNTT TFAHSSSANT INRMFVSNKE NNNASERMPD  300
GPALPMLPPT LELKPKENNP FMIYKHQIPS YDESSSRSNN EFGLVTSDSL LNPSHKRKDY  360
ESQQQHPLRH FIDDSPKPES HHHHHHHHLS GVWPELDMQP DKTQLSISIP ISSSDFMSFT  420
TSSPSNEKLT LSPLRLSRDD QCGGNNITSA LNLMKDGWDN SPPLGSSPTG VLQKTAFGSL  480
SNSSAESSPR SENNKEGATT LCNAL
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_32438
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150364e-96AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020236136.10.0growth-regulating factor 1
TrEMBLA0A151RUI40.0A0A151RUI4_CAJCA; Uncharacterized protein (Fragment)
STRINGGLYMA17G35090.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20853481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22840.16e-79growth-regulating factor 1