PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_32131
Common NameKK1_034151
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family AP2
Protein Properties Length: 302aa    MW: 34418.6 Da    PI: 6.5263
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_32131genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.28.5e-133591155
            AP2  1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                   s y+GV++++++gr++A+++d  ++n  ++k+ + g ++ +e Aa+a++ a++k++g
  C.cajan_32131 35 SIYRGVTRHRWTGRYEAHLWDkNCWNEsQSKKGRQGAYDDEEAAARAYDLAALKYWG 91
                   57*******************99998888888888********************98 PP
2AP253.27.4e-17134185155
            AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa+a+++a+ +++g
  C.cajan_32131 134 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAAAAYDKAAIEYRG 185
                    89****99**********99966...3.6*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.11E-1535101IPR016177DNA-binding domain
PfamPF008479.8E-93591IPR001471AP2/ERF domain
SMARTSM003804.3E-2236105IPR001471AP2/ERF domain
PROSITE profilePS5103219.0193699IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.4E-1336100IPR001471AP2/ERF domain
PRINTSPR003672.5E-63748IPR001471AP2/ERF domain
CDDcd000188.46E-15134195No hitNo description
PfamPF008473.7E-12134185IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-17134195IPR016177DNA-binding domain
SMARTSM003804.0E-25135199IPR001471AP2/ERF domain
PROSITE profilePS5103218.083135193IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.5E-18135194IPR001471AP2/ERF domain
PRINTSPR003672.5E-6175195IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MAKKSQKSLK NTTSTTTAKR TRKSVPRDSP PQRSSIYRGV TRHRWTGRYE AHLWDKNCWN  60
ESQSKKGRQG AYDDEEAAAR AYDLAALKYW GQDTILNFPL SNYEEKLKEM EGQSKEEYIG  120
SLRRKSSGFS RGVSKYRGVA RHHHNGRWEA RIGRVFGNKY LYLGTYATQE EAAAAYDKAA  180
IEYRGLNAVT NFDLSRYANW IRPNTEENHQ NPSNENLNTN PELELGFVSH DLGSSSDETR  240
EEGSSDYPPP PAESNPSRRT FPEDIQTIFE SEDSGIYNET DDIIFGDLGS FGAPIFHYEL  300
DA
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_32131
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020237785.10.0AP2-like ethylene-responsive transcription factor At1g16060
SwissprotQ94AN41e-115AP2L1_ARATH; AP2-like ethylene-responsive transcription factor At1g16060
TrEMBLA0A151RP850.0A0A151RP85_CAJCA; AP2-like ethylene-responsive transcription factor At1g16060 family
STRINGGLYMA07G02380.11e-171(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130034101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.15e-98ARIA-interacting double AP2 domain protein
Publications ? help Back to Top
  1. Todd J,Post-Beittenmiller D,Jaworski JG
    KCS1 encodes a fatty acid elongase 3-ketoacyl-CoA synthase affecting wax biosynthesis in Arabidopsis thaliana.
    Plant J., 1999. 17(2): p. 119-30
    [PMID:10074711]
  2. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]