PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_31991

Common Name

KK1_036577

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

HB-other

Protein Properties

Length: 1725aa MW: 195578 Da PI: 6.3603

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_31991	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.5	2e-17	47	102	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t+ qle+Le++++ ++yps+++r+eL +klgL++rq ++WF+ rR k++k C.cajan_31991 47 PKRHMKTPFQLETLEKAYAVDNYPSETMRAELFEKLGLSDRQLQMWFCHRRLKDRK 102 699***************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	2.5E-17	27	103	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.88E-16	36	102	IPR009057	Homeodomain-like
PROSITE profile	PS50071	16.487	43	103	IPR001356	Homeobox domain
SMART	SM00389	9.4E-16	45	107	IPR001356	Homeobox domain
Pfam	PF00046	3.8E-15	47	102	IPR001356	Homeobox domain
CDD	cd00086	3.79E-13	48	103	No hit	No description
SMART	SM00571	1.8E-20	546	605	IPR018501	DDT domain
PROSITE profile	PS50827	16.17	546	605	IPR018501	DDT domain
Pfam	PF02791	4.7E-16	548	602	IPR018501	DDT domain
Pfam	PF05066	3.2E-15	728	796	IPR007759	HB1/Asxl, restriction endonuclease HTH domain
Pfam	PF15612	1.6E-10	943	985	IPR028942	WHIM1 domain
Pfam	PF15613	3.8E-14	1122	1194	IPR028941	WHIM2 domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0010228	Biological Process	vegetative to reproductive phase transition of meristem
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1725 aa Download sequence Send to blast
MEDEGCLEGE NNRKRGGIDD DSNENNNNNN NGSSIKIVNS NEEQSKPKRH MKTPFQLETL 60 EKAYAVDNYP SETMRAELFE KLGLSDRQLQ MWFCHRRLKD RKELPTKKPP PLRKLPVEPL 120 PDSPTHDPRL GPEPGNEYGS GSDSRSSLYT RVEPLNVVSR GVNGYYESPH TMMELRAIAY 180 VEAQLGEPLR EDGPILGVEF DPLPLDAFGA PLAVTEQQKP PSFVYDNKIH ERRDVKTNKA 240 MARTSRDHQF LPKQSSIRSD AFGHCNQSHL HDPMEGSTRN PPFVHGNEHI PKFHATQGHS 300 SRARLLSQQD KQLIPHQSPS QDNDVAAQRE MYQNRANVGM HSHFTNRQIV EPENLNALPS 360 GQVLHNSAMR IEKKRKSGDA RDVEAHEMKI RKELEKQDNL RRKIEERTRK EMERKDLERR 420 KEEERLMRER LREEEKARRE IEKREKAEKM RQREQLRKEK EEERRKTALE KATARRIARE 480 SIELFEDEQL EMMELAASSK GISSIIHLDF DTLQHLESFR DSLSVFPPES VMLRKPFAIK 540 PWINSEKNVG NLFMVWRFLI TFADVLELWP FTIDEFVQAF HDYDSRLLGE IHVALLKVII 600 KDIQDVARTP STRLGMNQNG ATNFGGGHPK IVEGAYAWGF DIRNWHKHLN LLTWPEIFRQ 660 LALSTGYGPQ LKKKSITWSY ANGRDEGRNC EDIISTLRNG SAAENAFAKM HEKGLLAPRR 720 SRHRLTPGTV KFAAFHVLSL EDKKGLTILE LAEKIQISGL RDLTTSKTPE ASISVALSRD 780 VKLFKRIAPS TYCLRKAFRK DPADAESILS EARKKIQIYE NGFLAGEDAD DVEREESESD 840 EIDEDPEVDL SLSSANKTSE QCDNLTSNGK ENLDHDVELQ KERLNALVVL AAGANEGRST 900 RPKNGSKNAD APIAVTRQPG ACEDLNVGNL GEDNMEIDES KPGESWVQGL AEGEYSDLSV 960 EERLNALVVL VDVANEGSSI RVVLEERLEA ANALKKQMWA EAQLDKLCLR DDVFFKSDFP 1020 CINGNKVEIQ NSCPTLEGNQ SPLLGINISN NNKYVPSPSF AENQKAASSI QSLSIEKHSS 1080 LQDLYTSSDI HHTQSFAQYS KRSRSQLKSY ISHIAEEMYV YRSLPLGQDR RHNRYWQFVA 1140 SASSNDPGSG RIFVEYHDGN WRLIDTEEAF DVLLNSLDSR GIRESHLRLM LQKVETSFKQ 1200 NVCKNTQYSS SDGHTESDSP SSTLCGLNFD TLETSSSFKI ELGKSESEKK SALRRYQDFQ 1260 KWMWKECYSS SILCAMKYGK KRCKPQVVIC DICLNPYFFE DSHCSCCHRS FPSNNGFNFS 1320 KHAFQCGDKF SKDVFVLDYS LPLQTRLLKA LLAFIEVSVP PEAFQSNWTE DIRRPWSVKL 1380 SKSSSVEELL QIFTLLERAL KRNFLSSTFS TTGEQLGLNS MSKSVAQTST DPESIVVLPW 1440 VPLTTSAVSL RLFEFDASIV YVLRERPEPC EKKDDREYTK LPSRYNPSKS RKVVGRADLD 1500 NDEFMKVRSA PVKIVQSNNK QGEQGSCDKG RGKKLSKRKQ DSGHRNAKVA RSLNQRIKQQ 1560 RTGSEGQVGG RGRQTVKKRR ARERATEDLL LGHKGANRSS SIGRESLRSL DEDLNDDKAS 1620 PMTPIHMGAA NISNNTEEVE SDDNVQAMES DDNGQAVEYD QGNWEIGYNG TPSRWSRDLV 1680 GMSDEDVEAS EDDNDNNNGN SNEIGIEEED SEADVMSEGS DGTCK

Sequence ? help Back to Top

Protein Sequence Length: 1725 aa Download sequence Send to blast

MEDEGCLEGE NNRKRGGIDD DSNENNNNNN NGSSIKIVNS NEEQSKPKRH MKTPFQLETL  60
EKAYAVDNYP SETMRAELFE KLGLSDRQLQ MWFCHRRLKD RKELPTKKPP PLRKLPVEPL  120
PDSPTHDPRL GPEPGNEYGS GSDSRSSLYT RVEPLNVVSR GVNGYYESPH TMMELRAIAY  180
VEAQLGEPLR EDGPILGVEF DPLPLDAFGA PLAVTEQQKP PSFVYDNKIH ERRDVKTNKA  240
MARTSRDHQF LPKQSSIRSD AFGHCNQSHL HDPMEGSTRN PPFVHGNEHI PKFHATQGHS  300
SRARLLSQQD KQLIPHQSPS QDNDVAAQRE MYQNRANVGM HSHFTNRQIV EPENLNALPS  360
GQVLHNSAMR IEKKRKSGDA RDVEAHEMKI RKELEKQDNL RRKIEERTRK EMERKDLERR  420
KEEERLMRER LREEEKARRE IEKREKAEKM RQREQLRKEK EEERRKTALE KATARRIARE  480
SIELFEDEQL EMMELAASSK GISSIIHLDF DTLQHLESFR DSLSVFPPES VMLRKPFAIK  540
PWINSEKNVG NLFMVWRFLI TFADVLELWP FTIDEFVQAF HDYDSRLLGE IHVALLKVII  600
KDIQDVARTP STRLGMNQNG ATNFGGGHPK IVEGAYAWGF DIRNWHKHLN LLTWPEIFRQ  660
LALSTGYGPQ LKKKSITWSY ANGRDEGRNC EDIISTLRNG SAAENAFAKM HEKGLLAPRR  720
SRHRLTPGTV KFAAFHVLSL EDKKGLTILE LAEKIQISGL RDLTTSKTPE ASISVALSRD  780
VKLFKRIAPS TYCLRKAFRK DPADAESILS EARKKIQIYE NGFLAGEDAD DVEREESESD  840
EIDEDPEVDL SLSSANKTSE QCDNLTSNGK ENLDHDVELQ KERLNALVVL AAGANEGRST  900
RPKNGSKNAD APIAVTRQPG ACEDLNVGNL GEDNMEIDES KPGESWVQGL AEGEYSDLSV  960
EERLNALVVL VDVANEGSSI RVVLEERLEA ANALKKQMWA EAQLDKLCLR DDVFFKSDFP  1020
CINGNKVEIQ NSCPTLEGNQ SPLLGINISN NNKYVPSPSF AENQKAASSI QSLSIEKHSS  1080
LQDLYTSSDI HHTQSFAQYS KRSRSQLKSY ISHIAEEMYV YRSLPLGQDR RHNRYWQFVA  1140
SASSNDPGSG RIFVEYHDGN WRLIDTEEAF DVLLNSLDSR GIRESHLRLM LQKVETSFKQ  1200
NVCKNTQYSS SDGHTESDSP SSTLCGLNFD TLETSSSFKI ELGKSESEKK SALRRYQDFQ  1260
KWMWKECYSS SILCAMKYGK KRCKPQVVIC DICLNPYFFE DSHCSCCHRS FPSNNGFNFS  1320
KHAFQCGDKF SKDVFVLDYS LPLQTRLLKA LLAFIEVSVP PEAFQSNWTE DIRRPWSVKL  1380
SKSSSVEELL QIFTLLERAL KRNFLSSTFS TTGEQLGLNS MSKSVAQTST DPESIVVLPW  1440
VPLTTSAVSL RLFEFDASIV YVLRERPEPC EKKDDREYTK LPSRYNPSKS RKVVGRADLD  1500
NDEFMKVRSA PVKIVQSNNK QGEQGSCDKG RGKKLSKRKQ DSGHRNAKVA RSLNQRIKQQ  1560
RTGSEGQVGG RGRQTVKKRR ARERATEDLL LGHKGANRSS SIGRESLRSL DEDLNDDKAS  1620
PMTPIHMGAA NISNNTEEVE SDDNVQAMES DDNGQAVEYD QGNWEIGYNG TPSRWSRDLV  1680
GMSDEDVEAS EDDNDNNNGN SNEIGIEEED SEADVMSEGS DGTCK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	95	102	RRLKDRKE
2	1532	1539	KKLSKRKQ

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_31991

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020239812.1	0.0	LOW QUALITY PROTEIN: homeobox-DDT domain protein RLT1-like
TrEMBL	A0A151RHW6	0.0	A0A151RHW6_CAJCA; Homeobox protein EgHBX4
STRING	GLYMA07G32180.2	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2523	33	69

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	homeobox-1