PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_31327

Common Name

KK1_030480

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

Dof

Protein Properties

Length: 319aa MW: 34361.9 Da PI: 9.3862

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_31327	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.6	1.5e-39	56	116	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+++ C.cajan_31327 56 QQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 116 7899******************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	8.3E-34	58	114	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-27	59	114	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.525	60	114	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	62	98	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence Send to blast
MSDNSAKMVL IPPTTNQWPQ VDDHKVLMGS SGGSNNNNNN SKVMEKRGQE ILQQQQQQAL 60 KCPRCDSSNT KFCYYNNYSL SQPRHFCKAC KRYWTRGGTL RNVPVGGGCR KNKRVKRPIT 120 NPSSAAAAAI DTASNSSSSS APTATSQPQI DTASTSNHIN PLFYGLPSSS SDVNVNLPLF 180 PRFGSRISSS GFDLQLNDAL GLGFSSGVVS NEASDNNNGY RNGFGSNNTL LSSYNSIFGS 240 STSSSTATTP SMPSLLLQQK FMSGGLKDGQ SNRLEWNNGA CQNQIQHVGL YDPSLYWNNT 300 VGVWNDQAAN IGSSVTSLI

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_31327

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020234614.1	0.0	dof zinc finger protein DOF1.4 isoform X1
TrEMBL	A0A151RZ65	0.0	A0A151RZ65_CAJCA; Dof zinc finger protein DOF1.4
STRING	XP_007148145.1	1e-146	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF4522	33	56

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.1	6e-41	Dof family protein