PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_31325

Common Name

Dof11, Dof29, KK1_030478

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

Dof

Protein Properties

Length: 315aa MW: 33845.2 Da PI: 9.5257

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_31325	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.7	2.6e-38	33	93	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++ +kcprCds ntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rk k+++ C.cajan_31325 33 PQQPQKCPRCDSFNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRAK 93 67899***************************************************99976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.0E-32	35	91	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.77	37	91	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	1.0E-22	38	86	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	39	75	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence Send to blast
MEQEGGDTNK HPQAQDRVVK EMMQQGDAQV QAPQQPQKCP RCDSFNTKFC YYNNYSLSQP 60 RYFCKTCRRY WTQGGTLRNV PVGGGCRKGK RAKSSTSSSA AAEKSSSRPQ EVVVQTQPPS 120 LTVVRAKDPS SSSSSSSSVV ASPSMGPFYH SGGYLSSLAA MHSLNNPSSH PFDQSLNSDP 180 LRSSNLGLLS GFSVSSFNSQ RAIGPIRPPQ LYQMGSGERE FVSLYEQGLV NPSISSSMAN 240 TNTNISGVSQ HDWSRSFINN NIVSNRASDA SLWSTISTTV GGNSERTSAS SSAGVGSSSF 300 VQNQWPNLPG YGPPP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_31325

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KP662912	0.0	KP662912.1 Cajanus cajan Dof11 (Dof11) gene, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_029130431.1	0.0	dof zinc finger protein DOF3.4
TrEMBL	A0A0K8K636	0.0	A0A0K8K636_CAJCA; Dof protein
STRING	GLYMA13G31110.1	1e-146	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF4145	32	58

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	3e-29	TARGET OF MONOPTEROS 6

Publications ? help Back to Top
Malviya N, et al. Genome wide in silico characterization of Dof gene families of pigeonpea (Cajanus cajan (L) Millsp.). Mol. Biol. Rep., 2015. 42(2): p. 535-52 [PMID:25344821]