PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_30494
Common NameKK1_033054
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family G2-like
Protein Properties Length: 345aa    MW: 38446.5 Da    PI: 6.6188
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_30494genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like74.51.4e-232069153
        G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53
                   kprl+WtpeLH+rF+ea +qLG   +AtPk+++++m+++gLtl+h+kSHLQ +
  C.cajan_30494 20 KPRLKWTPELHQRFIEATNQLG---EATPKSLMRVMGIPGLTLYHLKSHLQAF 69
                   79*******************4...79************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.2E-221868IPR009057Homeodomain-like
SuperFamilySSF466891.13E-111970IPR009057Homeodomain-like
TIGRFAMsTIGR015573.9E-162069IPR006447Myb domain, plants
PfamPF002496.0E-72267IPR001005SANT/Myb domain
PfamPF143791.8E-21117163IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MDLQNMQNQS MHFVLSTDAK PRLKWTPELH QRFIEATNQL GEATPKSLMR VMGIPGLTLY  60
HLKSHLQAFI PLLLGKSQQL ETCSDNKQED YIETKSSDGH CSREISLGAQ NQITENMQIA  120
QALQMQMEVQ RKLYEQIEVQ KHLQLRIEAQ GKYLQSVLKK AQEALAGYNS SPVGIELTKA  180
ELSQLVTIIN NACPSSPISE LTETRGLSLN CGGERKRDRG TMCSLESSLT SSESSGRKEE  240
KQPIEEIGEF KSSKSVSLEL PLMNTHTEDK ASNGGSTNEA SGRKRTKSDD GNCVVEQPCG  300
KRCSNKLRKA KLSEMLDLNS QCQSDMDSTS SKTLDLNCSL NFWEP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-141969154Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-141969154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A1e-142069153Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-142069153Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-142069153Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-142069153Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-141969154Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-141969154Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-141969154Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-141969154Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-141969154Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-141969154Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_30494
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2353790.0AC235379.1 Glycine max strain Williams 82 clone GM_WBb0110B11, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020236738.10.0myb family transcription factor PHL8
TrEMBLA0A151RS910.0A0A151RS91_CAJCA; Myb family transcription factor APL
STRINGGLYMA02G12070.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF52183253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.18e-68G2-like family protein