PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_29823
Common NameKK1_031127
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 239aa    MW: 26195.6 Da    PI: 9.109
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_29823genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.72.4e-144087254
                   HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                   +++h e+ErrRR+riN  +++Lr+llP+a      K +Ka+ L ++ve++k L
  C.cajan_29823 40 CKSHREAERRRRQRINAHLSTLRSLLPNA-----AKSDKASLLGEVVEHVKRL 87
                   789*************************8.....7****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.9293887IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.8E-124087IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.6E-144191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.94E-144195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.1E-124493IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.23E-45190No hitNo description
Gene3DG3DSA:3.30.70.2601.3E-5124190No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MLPFRRFYGF ESWLDHHSSA SLIKKAVQLE SDRSKSTEAC KSHREAERRR RQRINAHLST  60
LRSLLPNAAK SDKASLLGEV VEHVKRLRKE ADDVARGDDP ASPQPFPGES DEATVSCCDG  120
EGRLRATLCC QDRPGLHRDL SQAIRAVRAR AVRAEMMTVG GRTKSVVVME WPEGEGGGAK  180
EEVGALERAL KAVMENRALV GFGMGPVVLG QKRARDSYGS PSTEVDSASA FFFRNGGVC
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_29823
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020235195.11e-175transcription factor bHLH30
TrEMBLA0A151RXH01e-174A0A151RXH0_CAJCA; Transcription factor bHLH30
STRINGGLYMA02G37720.11e-100(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF114412834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.12e-25bHLH family protein