PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_29771
Common NameKK1_030001
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 292aa    MW: 33944.8 Da    PI: 5.6693
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_29771genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.0001492115123
                    EEETTTTEEESSHHHHHHHHHH.T CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                    y+C+ Cg+ + ++ +LkrH r  H
  C.cajan_29771  92 YTCGVCGRKCGTHVELKRHFRQlH 115
                    9******************99877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.10107.0E-61282IPR029060PIN domain-like
PROSITE profilePS5015711.11592120IPR007087Zinc finger, C2H2
PROSITE patternPS00028094115IPR007087Zinc finger, C2H2
CDDcd061672.34E-10133222No hitNo description
Gene3DG3DSA:3.40.50.10107.0E-6155220IPR029060PIN domain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MVKNQQGTYA AKKEKVVVLW DLDNKPPRGP PYDAAVSLKS LAVGFGELVE FSAYANRHAF  60
VHLPQWVVEQ RRERKSLDIL ERKGAERASE AYTCGVCGRK CGTHVELKRH FRQLHERERQ  120
KKLNRLRSLK GKRKREXVGY GLAAELRRAG VFVKTVRDKP QAADWALKRQ MAHSMSRGID  180
WLFLVSDDSD FSEMLRRARE VDLGTVVVGD WDRALGRHAD LWLPWTAVEN GEVDVDVLPK  240
RRKHVFQDHH LNGEEFLVLY SEDEDEDEDE DEDVEDYYEE QEEEEEDGFS IF
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_29771
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150363e-92AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029130372.10.0LOW QUALITY PROTEIN: uncharacterized protein LOC109814221
TrEMBLA0A151S0J80.0A0A151S0J8_CAJCA; Uncharacterized protein
STRINGXP_007160873.11e-148(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF64413135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52010.11e-124C2H2-like zinc finger protein