PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_29495 | ||||||||
Common Name | KK1_031073 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | ARR-B | ||||||||
Protein Properties | Length: 530aa MW: 58662 Da PI: 5.266 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 88.8 | 5e-28 | 206 | 259 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++F+ av+qL G+ekA+Pk+ilelm+v+gLt+e+v+SHLQkYRl C.cajan_29495 206 KPRVVWSVELHQQFMAAVNQL-GIEKAVPKRILELMNVPGLTRENVASHLQKYRL 259 79*******************.********************************8 PP | |||||||
2 | Response_reg | 75.6 | 1.8e-25 | 30 | 138 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 vl+vdD+p+ +++l+++l+ y ev+ ++ +e al ll+e++ +D++l D+ mp+mdG++ll+ i e +lp+i+++a + ++ + + + Ga C.cajan_29495 30 VLVVDDDPTCLMILERMLRACLY-EVTKCKRAEVALSLLRENKngFDIVLSDVHMPDMDGFKLLELIGLEM-DLPVIMMSADDGKSVVMKGVTHGA 123 89*****************9999.***************999999**********************6644.8*********************** PP SEEEESS--HHHHHH CS Response_reg 95 kdflsKpfdpeelvk 109 d+l Kp+ +e+l + C.cajan_29495 124 CDYLIKPVRIEALKN 138 ***********9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PIRSF | PIRSF036392 | 2.9E-166 | 4 | 510 | IPR017053 | Response regulator B-type, plant |
Gene3D | G3DSA:3.40.50.2300 | 3.1E-41 | 27 | 171 | No hit | No description |
SuperFamily | SSF52172 | 4.98E-35 | 27 | 148 | IPR011006 | CheY-like superfamily |
SMART | SM00448 | 2.0E-29 | 28 | 140 | IPR001789 | Signal transduction response regulator, receiver domain |
PROSITE profile | PS50110 | 42.558 | 29 | 144 | IPR001789 | Signal transduction response regulator, receiver domain |
Pfam | PF00072 | 1.8E-22 | 30 | 138 | IPR001789 | Signal transduction response regulator, receiver domain |
CDD | cd00156 | 8.34E-28 | 31 | 144 | No hit | No description |
PROSITE profile | PS51294 | 10.154 | 203 | 262 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.24E-19 | 203 | 263 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.1E-29 | 205 | 264 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.4E-24 | 206 | 259 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 5.7E-7 | 208 | 258 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 530 aa Download sequence Send to blast |
MNLSNGKGST SSSVKTGDTI SDQFPAGLRV LVVDDDPTCL MILERMLRAC LYEVTKCKRA 60 EVALSLLREN KNGFDIVLSD VHMPDMDGFK LLELIGLEMD LPVIMMSADD GKSVVMKGVT 120 HGACDYLIKP VRIEALKNIW QHVIRKRKNG AKDVEQSGSV EEGDRLQKGS EDGDYSSSVN 180 EGKSSKKRRD EEDEGEERDD SSTLKKPRVV WSVELHQQFM AAVNQLGIEK AVPKRILELM 240 NVPGLTRENV ASHLQKYRLY LRRLSGVSHQ QSSLNNSFMS SQEASFGATS ISGIDLQAFS 300 AASQLQSQSL AKLQAAGLGR STAKPGVPMP LSDQKNLFSF ESPRLRFGEG QMQHLSNNKP 360 MNLLHGIPTN MEPKQLVNLH QSSQSLGITS MPTKGMFHED GTSDIKGAGG FVPNYDMFNE 420 FNHQKSNDWD LTNTGMTYDA SQHANPLQGE GMHQGNLQNV GQPLNNLLVD NSLRVKDERI 480 PDQSTQINNM MSEQYGQEDL ISAFLKQQEG IGPVEDEFDF DGYSLDNIST |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1irz_A | 2e-22 | 205 | 265 | 4 | 64 | ARR10-B |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins. Involved in the expression of nuclear genes for components of mitochondrial complex I. Promotes cytokinin-mediated leaf longevity. Involved in the ethylene signaling pathway in an ETR1-dependent manner and in the cytokinin signaling pathway. {ECO:0000269|PubMed:11370868, ECO:0000269|PubMed:11574878, ECO:0000269|PubMed:15282545, ECO:0000269|PubMed:16407152}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_29495 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020235131.1 | 0.0 | two-component response regulator ARR2 isoform X1 | ||||
Refseq | XP_020235132.1 | 0.0 | two-component response regulator ARR2 isoform X2 | ||||
Swissprot | Q9ZWJ9 | 1e-172 | ARR2_ARATH; Two-component response regulator ARR2 | ||||
TrEMBL | A0A151RXK9 | 0.0 | A0A151RXK9_CAJCA; Two-component response regulator | ||||
STRING | GLYMA15G15520.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3958 | 34 | 58 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 1e-151 | response regulator 2 |