PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_29457 | ||||||||
Common Name | KK1_033412 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | WRKY | ||||||||
Protein Properties | Length: 255aa MW: 27545.7 Da PI: 6.4011 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93 | 2.3e-29 | 73 | 131 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+ +++tY+ eHnh+ C.cajan_29457 73 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTKLIVTYSYEHNHS 131 69*************************998****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 6.8E-31 | 65 | 133 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.31E-25 | 68 | 133 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.9E-35 | 72 | 132 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 31.858 | 73 | 133 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.9E-25 | 74 | 130 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence Send to blast |
MYHRRFNKPI NVADPDEPEP ASEAGPASPS SGEDTKTEAP SPKKRREMKK RVVTIPIGDV 60 DGSKSKGETY PPSDSWAWRK YGQKPIKGSP YPRGYYRCSS SKGCPARKQV ERSRVDPTKL 120 IVTYSYEHNH SLPIPKSNSA AASAAASASL PSPAESADRF PPEEPAVFAT HSDLELAGDA 180 AVLLGHHHFG WFDDVSSTGV LESPICGEVD DVAVPMREED ESLFADLGEL PECSAVFRRR 240 NIPRGGAIPC GGITG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 3e-18 | 73 | 133 | 15 | 74 | WRKY transcription factor 1 |
5w3x_B | 3e-18 | 50 | 133 | 6 | 79 | Disease resistance protein RRS1 |
5w3x_D | 3e-18 | 50 | 133 | 6 | 79 | Disease resistance protein RRS1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_29457 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU375351 | 0.0 | EU375351.1 Glycine max transcription factor (WRKY16) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020237140.1 | 0.0 | probable WRKY transcription factor 69 | ||||
Swissprot | Q93WV5 | 2e-71 | WRK69_ARATH; Probable WRKY transcription factor 69 | ||||
TrEMBL | A0A151RR67 | 0.0 | A0A151RR67_CAJCA; Putative WRKY transcription factor 69 | ||||
STRING | XP_007149724.1 | 1e-154 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2770 | 34 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58710.2 | 4e-64 | WRKY DNA-binding protein 69 |
Publications ? help Back to Top | |||
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