PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_28489
Common NameKK1_032565
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Trihelix
Protein Properties Length: 332aa    MW: 37700.9 Da    PI: 9.9272
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_28489genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix48.32.6e-1528121187
       trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                    +W+++ + +Liea  e+  +l+rg+l++++W+ev++++       + ++  r+ +qCk++++ l+k+yk +k++ ++  ++ +s +p+f +l+a
  C.cajan_28489  28 CWSEEATFTLIEAWGERYLELNRGNLRQKHWQEVADAVnglhvgvAGKKPFRTDVQCKNRIDTLKKKYKIEKARVSDSDAGYRSPWPFFPRLDA 121
                    7***************************************999997777779*************************9999999*******985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.2E-2626122No hitNo description
Gene3DG3DSA:1.10.10.608.7E-44494IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MDSVAGDPSS TAPAAARPPP SFPRREDCWS EEATFTLIEA WGERYLELNR GNLRQKHWQE  60
VADAVNGLHV GVAGKKPFRT DVQCKNRIDT LKKKYKIEKA RVSDSDAGYR SPWPFFPRLD  120
ALIGDTFPLR KISPPAAAKP PPPAWMISSH PVGPRSVTQK RPAPVVTPAA RDDSSFRRNF  180
SAFAAAAAAA AEADSGDSEG WRSSSGTGSG KKGRESEKEF EFGYRELAQA IERFGEIYER  240
VEGMKQRQMV ELEKQRMQFA KDLEYQRMQL FMETQVQLQK LKRTKHSSGA GEHHFLSFLL  300
YFYFNFIKQL NTHMLLFLET KKMHFHISIE IV
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00413DAPTransfer from AT3G58630Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_28489
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020236351.10.0trihelix transcription factor ASIL2
TrEMBLA0A151RTL30.0A0A151RTL3_CAJCA; Uncharacterized protein
STRINGXP_004505493.11e-132(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18873379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.15e-53sequence-specific DNA binding transcription factors