PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_28137
Common NameKK1_030748
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 122aa    MW: 13935.7 Da    PI: 10.2329
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_28137genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.26.8e-062749123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   ++C++C+++F ++  L  H++ H
  C.cajan_28137 27 FRCHYCKRVFANSQALGGHQNAH 49
                   89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.58E-62454No hitNo description
Gene3DG3DSA:3.30.160.603.6E-42453IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.512754IPR007087Zinc finger, C2H2
PROSITE patternPS0002802949IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    Send to blast
MSSAPKLFGF PLTEQEEFAD VGEDRKFRCH YCKRVFANSQ ALGGHQNAHK KERQRARRFQ  60
IHTHQYHRRS HANAITSVGL LSSSASNTSP VTLQSIFFPF HLYVSSNVPP TSEREVDVHL  120
KL
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_28137
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0932082e-36BT093208.1 Soybean clone JCVI-FLGm-17A17 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020234817.15e-87zinc finger protein GIS3
TrEMBLA0A151RYB01e-85A0A151RYB0_CAJCA; Zinc finger protein 6
STRINGXP_007163160.12e-37(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39032449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.17e-16C2H2 family protein