PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_27778
Common NameKK1_029002
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 299aa    MW: 33657.1 Da    PI: 8.9433
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_27778genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H222.13.9e-07122143223
                    EETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                     C+ Cgk F+r  nL+ H+r H
  C.cajan_27778 122 FCEVCGKGFTRDANLRMHMRAH 143
                    6*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.95E-6118146No hitNo description
PROSITE profilePS5015712.508121148IPR007087Zinc finger, C2H2
SMARTSM003550.0018121143IPR015880Zinc finger, C2H2-like
PfamPF128746.6E-4122141No hitNo description
PROSITE patternPS000280123143IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.605.9E-7123146IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM0035521163196IPR015880Zinc finger, C2H2-like
Gene3DG3DSA:3.30.160.600.001215249IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MPKANKNSIE SSLHVSLRNL SQLSTRIDSL QTFLFQSIQS RTLLTHHQIT TVSNEILTAI  60
RHLITNAAAL TAAASQNLLP PTSDSPKHNN NNNNNNNNNM DNDETLVVEL DAVELLAKHL  120
HFCEVCGKGF TRDANLRMHM RAHGDEFKTA EALANGARGA TRFSCPFEGC NRNRKHKKFR  180
ALKSVFCLRN HFKRRHCPKT LRCERCLKKS FAVVSDLRSH AKQCRGEATW KCSCGTTFSR  240
KDKLFGHVAL FEGHVPMLEQ EKAKESDEGL PEGFFDGLDD FGFASMQDQT STWGFPQLI
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in aluminum tolerance. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_27778
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020233305.10.0protein SENSITIVE TO PROTON RHIZOTOXICITY 1
SwissprotQ943I66e-67STOP1_ORYSJ; Zinc finger protein STOP1 homolog
TrEMBLA0A151S3C60.0A0A151S3C6_CAJCA; Protein SENSITIVE TO PROTON RHIZOTOXICITY 1
STRINGXP_007159664.11e-151(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68553150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34370.32e-63C2H2 family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]