PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_27628
Common NameKK1_030411
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 346aa    MW: 39614.6 Da    PI: 5.5103
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_27628genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY741.9e-23240290150
                    ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEE CS
           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvvei 50 
                    ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+ +d +++++
  C.cajan_27628 240 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCIDDMSILIT 290
                    58***************************99************99999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.6E-25225290IPR003657WRKY domain
SuperFamilySSF1182901.14E-20233292IPR003657WRKY domain
PROSITE profilePS5081121.907235290IPR003657WRKY domain
SMARTSM007742.7E-24240291IPR003657WRKY domain
PfamPF031063.1E-20241290IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MEIDLSLKID TDDEQKQDMD ESVKEDEEEE KMTQIPDNNN KEEVPETPTG EIEDDASVVE  60
TSLQDNTKTK ELNVLQMEME SMKEENKVLR KVVEQTMKDY YDLQMKFSAI QENNKRKDHE  120
ISLSLQDIAT SSGEEPSKIL EIFNKKIIQR APSPPNTDDS LSESELGLSL RLQPSTSEKE  180
SDVGNNKEEK KDEQLASFAS SVQNKFQRTH ELPGITTHAA SPPNRKARVS VRARCEAATM  240
NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP GCPVRKQVQR CIDDMSILIT PCWCNCYGFY  300
SFCSSFLHVA RLKQPHFRWH LKFHSISTPS LQHLPPPKPC FKLQEH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-15227290163WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_27628
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by potassium deprivation. {ECO:0000269|PubMed:15173595}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0968481e-122BT096848.1 Soybean clone JCVI-FLGm-15D10 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020234553.10.0probable WRKY transcription factor 9
SwissprotQ9C9F01e-58WRKY9_ARATH; Probable WRKY transcription factor 9
TrEMBLA0A151RZK40.0A0A151RZK4_CAJCA; Putative WRKY transcription factor 9
STRINGGLYMA05G25270.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF93203141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.14e-57WRKY DNA-binding protein 9