PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_27298
Common NameKK1_030031
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family HD-ZIP
Protein Properties Length: 700aa    MW: 76621.6 Da    PI: 5.8652
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_27298genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.51.5e-2049104156
                    TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
       Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                    +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  C.cajan_27298  49 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 104
                    688999***********************************************999 PP
2START226.11.1e-702204401206
                    HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
          START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                    ela +a++el+ +a+ +ep+W +      +++n+de++++f+++ +     ++ ea+r+++vv+m++++lve+l+d++ qW++ +     +a+tle
  C.cajan_27298 220 ELAVAAMEELIGMAQMGEPLWLTTLdgtsTMLNEDEYIRSFPRGIGpkpsgFKCEASRETAVVIMNHVNLVEILMDVN-QWSTVFSgivsRAMTLE 314
                    57899**************************************999********************************.***************** PP

                    EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE- CS
          START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdl 172
                    v+s+g      galq+m++elq+++plvp R+++fvRy++q+ +g+w++vdvS+d+ ++ p    ++R++++pSg+li++++ng+skvtw+ehv++
  C.cajan_27298 315 VLSTGvagnynGALQVMTSELQLPTPLVPtRESYFVRYCKQHADGTWAVVDVSLDNLRPSP----SARCRRRPSGCLIQEMPNGYSKVTWIEHVEV 406
                    ***********************************************************99....5****************************** PP

                    -SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
          START 173 kgrlphwllrslvksglaegaktwvatlqrqcek 206
                    ++r +h+l+++lv+sg+a+gak+wvatl+rqce+
  C.cajan_27298 407 DDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCER 440
                    ********************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.3E-2328104IPR009057Homeodomain-like
SuperFamilySSF466891.46E-1938106IPR009057Homeodomain-like
PROSITE profilePS5007116.92546106IPR001356Homeobox domain
SMARTSM003891.2E-1947110IPR001356Homeobox domain
PfamPF000463.9E-1849104IPR001356Homeobox domain
CDDcd000862.29E-1949107No hitNo description
PROSITE patternPS00027081104IPR017970Homeobox, conserved site
PROSITE profilePS5084842.932211443IPR002913START domain
SuperFamilySSF559611.04E-34214442No hitNo description
CDDcd088751.60E-130215439No hitNo description
SMARTSM002343.8E-64220440IPR002913START domain
PfamPF018521.2E-59221440IPR002913START domain
Gene3DG3DSA:3.30.530.202.4E-5314431IPR023393START-like domain
SuperFamilySSF559614.4E-26459692No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010090Biological Processtrichome morphogenesis
GO:0048497Biological Processmaintenance of floral organ identity
GO:0005634Cellular Componentnucleus
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 700 aa     Download sequence    Send to blast
MEALEMGQNT SESEVPRIRE DEFDSATKSG SENHEGASGE DQDPRPNKKK RYHRHTQHQI  60
QEMEAFFKEC PHPDDKQRKE LSRELGLEPL QVKFWFQNKR TQMKTQHERH ENTQLRTENE  120
KLRADNMRYR EALSNASCPN CGGPTAIGEM SFDEHHLRLE NARLREEIDR ISAIAAKYVG  180
KPVVNYSNIS PSLPPRPLEL GVGAGFGGQP GIADKPIIIE LAVAAMEELI GMAQMGEPLW  240
LTTLDGTSTM LNEDEYIRSF PRGIGPKPSG FKCEASRETA VVIMNHVNLV EILMDVNQWS  300
TVFSGIVSRA MTLEVLSTGV AGNYNGALQV MTSELQLPTP LVPTRESYFV RYCKQHADGT  360
WAVVDVSLDN LRPSPSARCR RRPSGCLIQE MPNGYSKVTW IEHVEVDDRG VHNLYKQLVS  420
SGHAFGAKRW VATLDRQCER LASAMATNIP TVDVGVITNQ EGRKSMMKLA ERMVISFCAG  480
VSASTAHTWT TLSGTGADDV RVMTRKSSVD DPGRPPGIVL SAATSFWLPV PPKRVFDFLR  540
DENSRNEWDI LSNGGVVQEM AHIANGRDTG NCVSLLRVNS ANSSQSNMLI LQESCTDTTG  600
SFVIYAPVDI VAMNVVLNGG DPDYVALLPS GFAILPDGTT THGSGIGESG PGGSLLTVAF  660
QILVDSVPTA KLSLGSVATV NNLIACTVER IKASLSGEGA
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_27298
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020234201.10.0homeobox-leucine zipper protein HDG2 isoform X2
SwissprotQ94C370.0HDG2_ARATH; Homeobox-leucine zipper protein HDG2
TrEMBLA0A151S0I10.0A0A151S0I1_CAJCA; Homeobox-leucine zipper protein HDG2
STRINGXP_007132557.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15083499
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0homeodomain GLABROUS 2