PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_27185
Common NameKK1_030230
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GRAS
Protein Properties Length: 985aa    MW: 112857 Da    PI: 7.5909
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_27185genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS392.35.1e-1202045671374
           GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi.lkfsh 95 
                    l++ L++cA+a+++ dl +a++++ +++e++s +g+pmqRl ay++e+L arl +++ ++ykal++ e++    +++l+++++f++++ + +kf++
  C.cajan_27185 204 LKHNLVACAKAIADTDLIMAEWFVRKIREMVSVSGEPMQRLGAYMLEGLVARLEGTGGTIYKALKCYEAA---NAKRLSYMHMFHQICLLhFKFGY 296
                    6899*****************************************************************9...89*************8648**** PP

           GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                    + aN aI ea+ +e+r+HiiDf+i++G+QW++L++ +a+R++g+p++RiTgvg+  s+s+++l+ +g++L+k+Ae l+vpfef++ v  +  d++l
  C.cajan_27185 297 MCANGAIAEAMRNEDRIHIIDFQINEGIQWLTLIRDFAARAGGAPHIRITGVGD--STSADALQMVGNKLSKLAEDLKVPFEFHA-VPVSACDVQL 389
                    ******************************************************..55***************************.6888999*** PP

           GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak..lpreseerikv 285
                    ++L ++++E+laVn+++ lh++       e++rd++L+lv+slsPkvv++veqe+++n  +F+ rfle+l+yysa+f+s++a+  lp+e +eri +
  C.cajan_27185 390 QNLLIQSDEVLAVNFAFILHHVS------ENHRDRLLRLVRSLSPKVVTLVEQESNTNIVEFFPRFLETLDYYSAMFESMNANvdLPEEYKERIYI 479
                    **********************8......8889***********************************************6653389999****** PP

           GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                    E+ + +r+ivn++ace+aer+erhe l+kWr r+  aGF+p+pls ++++++k ll++++++ y+ ee++g+l+lgW++r+Lv+ +aW+
  C.cajan_27185 480 EQICYARDIVNIIACEEAERVERHELLGKWRLRFAIAGFTPYPLSPSVNATIKKLLENYGDR-YKFEERDGALYLGWMGRNLVASCAWT 567
                    ************************************************************66.*************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098557.059178548IPR005202Transcription factor GRAS
PfamPF035141.8E-117204567IPR005202Transcription factor GRAS
PfamPF142235.6E-21572685No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016021Cellular Componentintegral component of membrane
Sequence ? help Back to Top
Protein Sequence    Length: 985 aa     Download sequence    Send to blast
MQAQIWRFVC LISSVVGLVC YALSSSFNLL FGKWNLLKML SYSVFSFTIC LAVWFAKVCQ  60
LSYSRNLMCK AHMSVVVLTA TSVYSFFYDK EVNTKPDAYS LISCAAFAVM SLSLSRQTHL  120
GFELDILYFF LGCFILQLMK IKLLLVIVGV CFSYSLIILR SSLESSDYTL PLFHHPDITD  180
SLQPHPDFAL VVPDCGSNYM QTVLKHNLVA CAKAIADTDL IMAEWFVRKI REMVSVSGEP  240
MQRLGAYMLE GLVARLEGTG GTIYKALKCY EAANAKRLSY MHMFHQICLL HFKFGYMCAN  300
GAIAEAMRNE DRIHIIDFQI NEGIQWLTLI RDFAARAGGA PHIRITGVGD STSADALQMV  360
GNKLSKLAED LKVPFEFHAV PVSACDVQLQ NLLIQSDEVL AVNFAFILHH VSENHRDRLL  420
RLVRSLSPKV VTLVEQESNT NIVEFFPRFL ETLDYYSAMF ESMNANVDLP EEYKERIYIE  480
QICYARDIVN IIACEEAERV ERHELLGKWR LRFAIAGFTP YPLSPSVNAT IKKLLENYGD  540
RYKFEERDGA LYLGWMGRNL VASCAWTSLY VTTPETIWDY LKEEYAGDER IRSMQVLNLM  600
REFEIQRMKE TETIKQYSDK LLGIANKVRL LGTQFLDSRI VEKILVTIPE RYEASIAALE  660
NTKDLSKITL AEVLHALQAL EQRRLMREEG SVEGVYLAKW KNKNSGKNKK KELFQENSQH  720
NNTQIFPPCP YCKKTNHPQQ RCWWRPDVKC DNCGKLGHLK HVCKSHEQQE EANIVEDQQE  780
EGEEELLSMS CFMTKKPSKA WIIDSGCTNH MTYDRELFKE LNKTDISKVQ MGNGAHLAVK  840
GKGTLAIKSH SGFKLISDVL YVPDINQNLL SVSQLLGKGY KVLFEDKNCV IKDIHNKEVF  900
NVHMKGKSFA LNLEKEEPII NEDTSEEHKD ACLQKKFDDQ EENEDDEKSP SKEKFETNVK  960
VVPLKKNYNK NHKKKKPIKK RKSRF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3h_A7e-5021156725378Protein SCARECROW
5b3h_D7e-5021156725378Protein SCARECROW
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1972979KKKKPIKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_27185
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020234367.10.0scarecrow-like protein 21
TrEMBLA0A151S0850.0A0A151S085_CAJCA; Scarecrow-like transcription factor PAT1
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.21e-158GRAS family protein